Information for 1-CATA (Motif 5)

A G T C C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C T G
p-value:1e-2
log p-value:-5.981e+00
Information Content per bp:1.530
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif94.00%
Number of Background Sequences with motif31404.6
Percentage of Background Sequences with motif78.26%
Average Position of motif in Targets453.0 +/- 287.2bp
Average Position of motif in Background450.2 +/- 272.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)2.98
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atoh1/MA0461.2/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CATA----
ANCATATGTT
 A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

OLIG3/MA0827.1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CATA----
ACCATATGTT
 A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

BHLHE22/MA0818.1/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CATA----
ACCATATGTT
 A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T

NEUROD2/MA0668.1/Jaspar

Match Rank:4
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CATA----
ACCATATGGC
 A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C

OLIG2/MA0678.1/Jaspar

Match Rank:5
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CATA----
ACCATATGGT
 A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

NEUROG1/MA0623.2/Jaspar

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CATA----
GACATATGTC
 A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
T C A G T G C A A T G C C T G A G A C T C T G A A G C T A C T G A C G T A G T C

BHLHE23/MA0817.1/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CATA-----
AAACATATGTTT
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

OLIG1/MA0826.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CATA----
AACATATGTT
 A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CATA---
CCATATGT
 A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

NEUROG2/MA0669.1/Jaspar

Match Rank:10
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CATA----
GACATATGTT
 A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T