Information for 4-CCSAGCGGGA (Motif 4)

T A G C A T G C A T G C T G C A A T C G G T A C A C T G T A C G C T A G G T C A
Reverse Opposite:
A C G T A G T C A T G C G T A C A C T G A T G C A C G T T A C G T A C G A T C G
p-value:1e-4
log p-value:-1.059e+01
Information Content per bp:1.790
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif28.00%
Number of Background Sequences with motif3197.2
Percentage of Background Sequences with motif7.97%
Average Position of motif in Targets511.2 +/- 280.9bp
Average Position of motif in Background606.5 +/- 314.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CCSAGCGGGA--
CHCAGCRGGRGG
 T A G C A T G C A T G C T G C A A T C G G T A C A C T G T A C G C T A G G T C A A C G T A C G T
T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.75
Offset:3
Orientation:forward strand
Alignment:CCSAGCGGGA---
---GGCGGGAARN
 T A G C A T G C A T G C T G C A A T C G G T A C A C T G T A C G C T A G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

TFDP1/MA1122.1/Jaspar

Match Rank:3
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CCSAGCGGGA---
--GGGCGGGAAGG
 T A G C A T G C A T G C T G C A A T C G G T A C A C T G T A C G C T A G G T C A A C G T A C G T A C G T
A C G T A C G T T A C G T A C G T A C G G A T C T A C G T A C G A T C G C T G A T G C A T A C G T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCSAGCGGGA----
DCHCAGCAGGRGGCC
 A C G T T A G C A T G C A T G C T G C A A T C G G T A C A C T G T A C G C T A G G T C A A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCSAGCGGGA--
CCACACAGCAGGAGA
 A C G T A C G T A C G T T A G C A T G C A T G C T G C A A T C G G T A C A C T G T A C G C T A G G T C A A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCSAGCGGGA
DCTCAGCAGG-
 A C G T T A G C A T G C A T G C T G C A A T C G G T A C A C T G T A C G C T A G G T C A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCSAGCGGGA--
CCACACAGCAGGAGA
 A C G T A C G T A C G T T A G C A T G C A T G C T G C A A T C G G T A C A C T G T A C G C T A G G T C A A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCSAGCGGGA--
GAGCACAGCAGGACA
 A C G T A C G T A C G T T A G C A T G C A T G C T G C A A T C G G T A C A C T G T A C G C T A G G T C A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CCSAGCGGGA---
---GGCGGGAAAH
 T A G C A T G C A T G C T G C A A T C G G T A C A C T G T A C G C T A G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCSAGCGGGA-
-CWGGCGGGAA
 T A G C A T G C A T G C T G C A A T C G G T A C A C T G T A C G C T A G G T C A A C G T
A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A