Information for 8-GAGAAGCTRT (Motif 8)

A C T G C G T A C T A G C T G A C T G A A C T G A G T C A C G T T C A G A C G T
Reverse Opposite:
G T C A A G T C C G T A A C T G G T A C A G C T A G C T A G T C A C G T A G T C
p-value:1e-6
log p-value:-1.539e+01
Information Content per bp:1.826
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif24.00%
Number of Background Sequences with motif1613.8
Percentage of Background Sequences with motif3.68%
Average Position of motif in Targets416.2 +/- 256.2bp
Average Position of motif in Background491.2 +/- 301.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OSR2/MA1646.1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAGAAGCTRT
AAACAGAAGCAG-
 A C G T A C G T A C G T A C T G C G T A C T A G C T G A C T G A A C T G A G T C A C G T T C A G A C G T
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G A C G T

MSC/MA0665.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGAAGCTRT-
-AACAGCTGTT
 A C T G C G T A C T A G C T G A C T G A A C T G A G T C A C G T T C A G A C G T A C G T
A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GAGAAGCTRT
TTGACCGAGAATTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T A G C T G A C T G A A C T G A G T C A C G T T C A G A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGAAGCTRT
BAACAGCTGT
 A C T G C G T A C T A G C T G A C T G A A C T G A G T C A C G T T C A G A C G T
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T

GRHL2/MA1105.2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAGAAGCTRT---
-NAAACCTGTTTN
 A C T G C G T A C T A G C T G A C T G A A C T G A G T C A C G T T C A G A C G T A C G T A C G T A C G T
A C G T G T C A T C G A C T G A C T G A A T G C G A T C C G A T A T C G G A C T G A C T A G C T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGAAGCTRT-
-AGCAGCTGCT
 A C T G C G T A C T A G C T G A C T G A A C T G A G T C A C G T T C A G A C G T A C G T
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGAAGCTRT-
NNAGCAGCTGCT
 A C G T A C T G C G T A C T A G C T G A C T G A A C T G A G T C A C G T T C A G A C G T A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

ATOH1(var.2)/MA1467.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAGAAGCTRT-
-AACAGCTGTC
 A C T G C G T A C T A G C T G A C T G A A C T G A G T C A C G T T C A G A C G T A C G T
A C G T T C G A T C G A A G T C C G T A A C T G G T A C A C G T A C T G G A C T A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAGAAGCTRT-
-----GCTGTG
 A C T G C G T A C T A G C T G A C T G A A C T G A G T C A C G T T C A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GAGAAGCTRT
GNNACCGAGAATNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T A G C T G A C T G A A C T G A G T C A C G T T C A G A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T