Information for 7-AATGTATCCT (Motif 7)

C G T A C G T A C G A T C T A G A C G T G T C A C G A T A G T C A G T C A C G T
Reverse Opposite:
G T C A A C T G C T A G C G T A C A G T G T C A A G T C C G T A A C G T A C G T
p-value:1e-6
log p-value:-1.606e+01
Information Content per bp:1.855
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif16.00%
Number of Background Sequences with motif500.8
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets305.4 +/- 158.0bp
Average Position of motif in Background456.2 +/- 267.2bp
Strand Bias (log2 ratio + to - strand density)-3.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AATGTATCCT-
AATGTATCAAT
 C G T A C G T A C G A T C T A G A C G T G T C A C G A T A G T C A G T C A C G T A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

DMRTA2/MA1478.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AATGTATCCT--
AATGTAACAATT
 C G T A C G T A C G A T C T A G A C G T G T C A C G A T A G T C A G T C A C G T A C G T A C G T
T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T

DMRTC2/MA1479.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AATGTATCCT--
AATGTATCAATT
 C G T A C G T A C G A T C T A G A C G T G T C A C G A T A G T C A G T C A C G T A C G T A C G T
G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AATGTATCCT-
AAGATATCCTT
 C G T A C G T A C G A T C T A G A C G T G T C A C G A T A G T C A G T C A C G T A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

Dmrt1/MA1603.1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AATGTATCCT
GATACAAAGTATC--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C T A G A C G T G T C A C G A T A G T C A G T C A C G T
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATGTATCCT-----
GATAACATCCTAGTAG
 A C G T C G T A C G T A C G A T C T A G A C G T G T C A C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

FOXA1/MA0148.4/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AATGTATCCT-
NNATGTTTACAT
 A C G T C G T A C G T A C G A T C T A G A C G T G T C A C G A T A G T C A G T C A C G T A C G T
G C T A G T A C G C T A C G A T C T A G G C A T C A G T A C G T C T G A G A T C G C T A G C A T

TEAD2/MA1121.1/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AATGTATCCT
GNNTGGAATGTGN---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C T A G A C G T G T C A C G A T A G T C A G T C A C G T
A T C G T A C G G A T C C G A T C T A G T C A G G C T A T C G A G A C T A C T G A G C T C T A G C T G A A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AATGTATCCT
CAGCTGTTTCCT
 A C G T A C G T C G T A C G T A C G A T C T A G A C G T G T C A C G A T A G T C A G T C A C G T
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AATGTATCCT
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C T A G A C G T G T C A C G A T A G T C A G T C A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T