Information for 6-TGCGATTTCC (Motif 6)

A C G T A C T G A T G C A C T G G T C A A C G T C G A T A C G T A G T C A G T C
Reverse Opposite:
C T A G A C T G C G T A C G T A C G T A A C G T T G A C A T C G A G T C G T C A
p-value:1e-7
log p-value:-1.632e+01
Information Content per bp:1.868
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif16.00%
Number of Background Sequences with motif483.7
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets484.0 +/- 281.8bp
Average Position of motif in Background531.1 +/- 308.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGCGATTTCC
GGGGATTTCC
 A C G T A C T G A T G C A C T G G T C A A C G T C G A T A C G T A G T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGCGATTTCC
GGGAATTTCC
 A C G T A C T G A T G C A C T G G T C A A C G T C G A T A C G T A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGCGATTTCC
GGGAATTTCC
 A C G T A C T G A T G C A C T G G T C A A C G T C G A T A C G T A G T C A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TGCGATTTCC----
----ATTTCCTGTN
 A C G T A C T G A T G C A C T G G T C A A C G T C G A T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGCGATTTCC-
NGGGGATTTCCC
 A C G T A C G T A C T G A T G C A C T G G T C A A C G T C G A T A C G T A G T C A G T C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGCGATTTCC
GGGGATTTCC
 A C G T A C T G A T G C A C T G G T C A A C G T C G A T A C G T A G T C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGCGATTTCC----
--NNAYTTCCTGHN
 A C G T A C T G A T G C A C T G G T C A A C G T C G A T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TGCGATTTCC---
---ATTTTCCATT
 A C G T A C T G A T G C A C T G G T C A A C G T C G A T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

PB0115.1_Ehf_2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCGATTTCC------
TAGTATTTCCGATCTT
 A C G T A C T G A T G C A C T G G T C A A C G T C G A T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGCGATTTCC
TTGCGGTTT--
 A C G T A C G T A C T G A T G C A C T G G T C A A C G T C G A T A C G T A G T C A G T C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T