Information for 5-GTAT (Motif 13)

A C T G A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C
p-value:1e0
log p-value:-6.677e-01
Information Content per bp:1.530
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif76.00%
Number of Background Sequences with motif32930.6
Percentage of Background Sequences with motif75.03%
Average Position of motif in Targets450.4 +/- 293.4bp
Average Position of motif in Background451.2 +/- 281.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)3.32
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.78
Offset:-7
Orientation:reverse strand
Alignment:-------GTAT------
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GTAT----
AATGTATCAAT
 A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PH0161.1_Six1/Jaspar

Match Rank:3
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------GTAT-------
GATGGGGTATCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GTAT-------
ACCCGTATCAAATTT
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:5
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------GTAT-------
AATAGGGTATCATATAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:6
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------GTAT-------
AATAGGGTATCAATATT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PH0162.1_Six2/Jaspar

Match Rank:7
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GTAT-------
AATGGGGTATCACGTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0165.1_Six6_1/Jaspar

Match Rank:8
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------GTAT-------
AATAGGGTATCAATTAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

Six3/MA0631.1/Jaspar

Match Rank:9
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------GTAT-------
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:10
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------GTAT-------
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T