Information for 2-TTAA (Motif 12)

A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A
p-value:1e0
log p-value:-1.034e+00
Information Content per bp:1.530
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif80.00%
Number of Background Sequences with motif33630.3
Percentage of Background Sequences with motif76.62%
Average Position of motif in Targets403.8 +/- 282.6bp
Average Position of motif in Background448.8 +/- 290.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)4.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---TTAA----
ATATTAATTAA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TTAA-
TTTAAT
 A C G T A C G T A C G T C G T A C G T A A C G T
G C A T A C G T A C G T C T G A C G T A A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:3
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----TTAA
GTAATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.78
Offset:-6
Orientation:forward strand
Alignment:------TTAA-------
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

NKX6-2/MA0675.1/Jaspar

Match Rank:5
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----TTAA
CTAATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:6
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTAA-----
TTTAATTGCN
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

BSX/MA0876.1/Jaspar

Match Rank:7
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TTAA----
NTAATTGG
 A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TTAA-
YCATTAMC
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

PB0109.1_Bbx_2/Jaspar

Match Rank:9
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------TTAA-------
TGATTGTTAACAGTTGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

GSX1/MA0892.1/Jaspar

Match Rank:10
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TTAA-----
NNTAATTAGN
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G A T A G C T G C A T C G T A C G T A A G C T C A G T C T G A T A C G C A T G