Information for 12-GCTGATGCTG (Motif 11)

A C T G A G T C A C G T A C T G G T C A C A G T A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C G T C A A C T G A G T C G T C A C A G T A G T C C G T A A C T G G T A C
p-value:1e-4
log p-value:-9.559e+00
Information Content per bp:1.870
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif18.00%
Number of Background Sequences with motif1589.0
Percentage of Background Sequences with motif3.62%
Average Position of motif in Targets564.7 +/- 260.5bp
Average Position of motif in Background529.9 +/- 340.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCTGATGCTG----
AGATGCTRCTRCCHT
 A C G T A C T G A G T C A C G T A C T G G T C A C A G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGATGCTG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G G T C A C A G T A C T G A G T C A C G T A C T G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTGATGCTG
AGCAGCTGCT-
 A C G T A C T G A G T C A C G T A C T G G T C A C A G T A C T G A G T C A C G T A C T G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCTGATGCTG
-CAGCTGNT-
 A C T G A G T C A C G T A C T G G T C A C A G T A C T G A G T C A C G T A C T G
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTGATGCTG
CGCAGCTGCG-
 A C G T A C T G A G T C A C G T A C T G G T C A C A G T A C T G A G T C A C G T A C T G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCTGATGCTG
SSRGCAGCTGCH-
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G G T C A C A G T A C T G A G T C A C G T A C T G
T A C G T A C G C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTGATGCTG-
AGCAGCTGCTNN
 A C G T A C T G A G T C A C G T A C T G G T C A C A G T A C T G A G T C A C G T A C T G A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

ASCL1/MA1100.2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTGATGCTG
GGCAGCTGCC-
 A C G T A C T G A G T C A C G T A C T G G T C A C A G T A C T G A G T C A C G T A C T G
T C A G T C A G A G T C G C T A A T C G T A G C C A G T C T A G A G T C A G T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTGATGCTG
NGCTN------
 A C G T A C T G A G T C A C G T A C T G G T C A C A G T A C T G A G T C A C G T A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

OSR2/MA1646.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCTGATGCTG---
-NNGCTTCTGTNN
 A C T G A G T C A C G T A C T G G T C A C A G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T