Information for 2-CTTA (Motif 9)

A G T C A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C T G
p-value:1e0
log p-value:-7.570e-01
Information Content per bp:1.530
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif91.49%
Number of Background Sequences with motif36758.9
Percentage of Background Sequences with motif89.80%
Average Position of motif in Targets433.0 +/- 280.9bp
Average Position of motif in Background489.6 +/- 318.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-1/MA0124.2/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----CTTA-
ACCACTTAA
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C G T
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

Nkx3-2/MA0122.3/Jaspar

Match Rank:2
Score:0.77
Offset:-7
Orientation:forward strand
Alignment:-------CTTA--
ATAACCACTTAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CTTA----
NCCTTATCTG
 A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:4
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CTTA-----
YCTTATCTBN
 A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CTTA----
NNCTTATCTN
 A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C

GATA2/MA0036.3/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CTTA-----
TTCTTATCTTT
 A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T A G C T A G T C G C A T G C A T C G T A G C A T A G T C G C A T A G C T G A C T

HLTF/MA0109.1/Jaspar

Match Rank:7
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CTTA---
AACCTTATAT
 A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.73
Offset:-8
Orientation:forward strand
Alignment:--------CTTA-----
CATAACCACTTAACAAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.73
Offset:-8
Orientation:forward strand
Alignment:--------CTTA-----
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

GATA4/MA0482.2/Jaspar

Match Rank:10
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CTTA-----
TTCCTTATCTTT
 A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G C A T G C A T A G T C G A T C G C A T G C A T G T C A G C A T A G T C G C A T A G C T G C A T