Information for 1-AKGGCAAAAC (Motif 1)

C T G A A C T G A C T G C T A G A G T C C G T A C T G A C G T A C G T A G A T C
Reverse Opposite:
C T A G A C G T A C G T A G C T A C G T C T A G A G T C A G T C G T A C A G C T
p-value:1e-9
log p-value:-2.073e+01
Information Content per bp:1.808
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif25.53%
Number of Background Sequences with motif988.2
Percentage of Background Sequences with motif2.41%
Average Position of motif in Targets550.0 +/- 336.5bp
Average Position of motif in Background496.5 +/- 313.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AKGGCAAAAC--
ARGAGGMCAAAATGW
 A C G T A C G T A C G T C T G A A C T G A C T G C T A G A G T C C G T A C T G A C G T A C G T A G A T C A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AKGGCAAAAC---
CAATTGCAAAAATAT
 A C G T A C G T C T G A A C T G A C T G C T A G A G T C C G T A C T G A C G T A C G T A G A T C A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AKGGCAAAAC------
AACACCAAAACAAAGGA
 A C G T C T G A A C T G A C T G C T A G A G T C C G T A C T G A C G T A C G T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AKGGCAAAAC
NATGGAAAAN-
 A C G T C T G A A C T G A C T G C T A G A G T C C G T A C T G A C G T A C G T A G A T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AKGGCAAAAC
TNNGGGCAG---
 A C G T A C G T C T G A A C T G A C T G C T A G A G T C C G T A C T G A C G T A C G T A G A T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AKGGCAAAAC-------
---GCAAAACATTACTA
 C T G A A C T G A C T G C T A G A G T C C G T A C T G A C G T A C G T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AKGGCAAAAC
AATGGAAAAT-
 A C G T C T G A A C T G A C T G C T A G A G T C C G T A C T G A C G T A C G T A G A T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AKGGCAAAAC
-TGGAAAA--
 C T G A A C T G A C T G C T A G A G T C C G T A C T G A C G T A C G T A G A T C
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AKGGCAAAAC------
ATATCAAAACAAAACA
 C T G A A C T G A C T G C T A G A G T C C G T A C T G A C G T A C G T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AKGGCAAAAC-----
ATGTCACAACAACAC
 C T G A A C T G A C T G C T A G A G T C C G T A C T G A C G T A C G T A G A T C A C G T A C G T A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C