Information for 6-CTATCAGTCC (Motif 6)

A G T C A G C T G C T A C G A T A G T C G T C A A T C G A G C T A T G C A G T C
Reverse Opposite:
C T A G A T C G T C G A T A G C C A G T T C A G G C T A C G A T C T G A C T A G
p-value:1e-4
log p-value:-1.006e+01
Information Content per bp:1.699
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif22.00%
Number of Background Sequences with motif2157.6
Percentage of Background Sequences with motif5.19%
Average Position of motif in Targets498.8 +/- 298.6bp
Average Position of motif in Background561.2 +/- 333.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.45
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTATCAGTCC-
NCTGTCAATCAN
 A C G T A G T C A G C T G C T A C G A T A G T C G T C A A T C G A G C T A T G C A G T C A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PKNOX1/MA0782.2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTATCAGTCC--
NNGCTGTCACTCANN
 A C G T A C G T A C G T A G T C A G C T G C T A C G A T A G T C G T C A A T C G A G C T A T G C A G T C A C G T A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTATCAGTCC
GSCTGTCACTCA
 A C G T A C G T A G T C A G C T G C T A C G A T A G T C G T C A A T C G A G C T A T G C A G T C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PBX3/MA1114.1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTATCAGTCC---
NNNCCTGTCACTCANNN
 A C G T A C G T A C G T A C G T A G T C A G C T G C T A C G A T A G T C G T C A A T C G A G C T A T G C A G T C A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTATCAGTCC-
ACTACAATTCCC
 A C G T A G T C A G C T G C T A C G A T A G T C G T C A A T C G A G C T A T G C A G T C A C G T
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTATCAGTCC-
SCTGTCAVTCAV
 A C G T A G T C A G C T G C T A C G A T A G T C G T C A A T C G A G C T A T G C A G T C A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTATCAGTCC-
---ACATTCCA
 A G T C A G C T G C T A C G A T A G T C G T C A A T C G A G C T A T G C A G T C A C G T
A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

TEAD2/MA1121.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTATCAGTCC----
-TCACATTCCAGCC
 A G T C A G C T G C T A C G A T A G T C G T C A A T C G A G C T A T G C A G T C A C G T A C G T A C G T A C G T
A C G T G A C T G A T C T C G A T G A C C T G A A G C T C G A T A G T C G A T C G C T A C A T G A T G C T A G C

TEAD4/MA0809.2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTATCAGTCC---
-CCACATTCCAGG
 A G T C A G C T G C T A C G A T A G T C G T C A A T C G A G C T A T G C A G T C A C G T A C G T A C G T
A C G T G A T C G A T C C T G A T G A C G C T A A G C T C G A T A G T C G A T C G C T A C T A G T A C G

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTATCAGTCC---
---GCATTCCAGN
 A G T C A G C T G C T A C G A T A G T C G T C A A T C G A G C T A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G