Information for 2-TCGAAACTGC (Motif 2)

A C G T T G A C A C T G C G T A C G T A C T G A A G T C C G A T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A A C T G A G C T A C G T A C G T A G T C A C T G G T C A
p-value:1e-6
log p-value:-1.545e+01
Information Content per bp:1.871
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif14.00%
Number of Background Sequences with motif340.1
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets479.2 +/- 299.5bp
Average Position of motif in Background550.7 +/- 303.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0034.1_Irf4_1/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----TCGAAACTGC-
CGTATCGAAACCAAA
 A C G T A C G T A C G T A C G T A C G T T G A C A C T G C G T A C G T A C T G A A G T C C G A T A T C G A G T C A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

IRF6/MA1509.1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TCGAAACTGC
ACCGAAACT--
 A C G T A C G T T G A C A C T G C G T A C G T A C T G A A G T C C G A T A T C G A G T C
T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T A C G T A C G T

PRDM4/MA1647.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TCGAAACTGC-
NAGAAACAGNN
 A C G T T G A C A C T G C G T A C G T A C T G A A G T C C G A T A T C G A G T C A C G T
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----TCGAAACTGC
ATAAACCGAAACCAA
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C A C T G C G T A C G T A C T G A A G T C C G A T A T C G A G T C
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

PB0036.1_Irf6_1/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TCGAAACTGC---
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A C G T A C G T T G A C A C T G C G T A C G T A C T G A A G T C C G A T A T C G A G T C A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TCGAAACTGC
CAAAATCGAAACTAA
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C A C T G C G T A C G T A C T G A A G T C C G A T A T C G A G T C
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

PB0033.1_Irf3_1/Jaspar

Match Rank:7
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TCGAAACTGC
GAGAACCGAAACTG-
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C A C T G C G T A C G T A C T G A A G T C C G A T A T C G A G T C
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCGAAACTGC--
--NHAACBGYYV
 A C G T T G A C A C T G C G T A C G T A C T G A A G T C C G A T A T C G A G T C A C G T A C G T
A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCGAAACTGC-
-CGCAGCTGCG
 A C G T T G A C A C T G C G T A C G T A C T G A A G T C C G A T A T C G A G T C A C G T
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCGAAACTGC
ACTGAAACCA-
 A C G T A C G T T G A C A C T G C G T A C G T A C T G A A G T C C G A T A T C G A G T C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T