Information for 5-AGCTTTAAGC (Motif 5)

C G T A A C T G A T G C A C G T A C G T C A G T C G T A C T G A C T A G G T A C
Reverse Opposite:
A C T G A G T C A G C T C G A T G T C A C G T A C G T A A T C G A G T C C G A T
p-value:1e-5
log p-value:-1.243e+01
Information Content per bp:1.854
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif10.42%
Number of Background Sequences with motif209.4
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets397.7 +/- 227.5bp
Average Position of motif in Background524.1 +/- 293.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGCTTTAAGC
CAAGCTT-----
 A C G T A C G T C G T A A C T G A T G C A C G T A C G T C A G T C G T A C T G A C T A G G T A C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCTTTAAGC---
BCWGATTCAATCAAN
 A C G T A C G T C G T A A C T G A T G C A C G T A C G T C A G T C G T A C T G A C T A G G T A C A C G T A C G T A C G T
A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A

PB0184.1_Tbp_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGCTTTAAGC--
GNNCGCTTAAATCGG
 A C G T A C G T A C G T C G T A A C T G A T G C A C G T A C G T C A G T C G T A C T G A C T A G G T A C A C G T A C G T
C A T G T A C G C A G T G T A C A T C G T A G C C G A T C A G T C G T A C G T A C T G A G C A T A T G C T A C G A C T G

PPARD/MA1550.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGCTTTAAGC---
NTGACCTTTGACCCCN
 A C G T A C G T A C G T C G T A A C T G A T G C A C G T A C G T C A G T C G T A C T G A C T A G G T A C A C G T A C G T A C G T
C A G T G A C T T C A G T G C A G T A C G T A C A G C T G A C T A G C T T C A G T G C A G T A C G A T C A G T C A G T C C G A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCTTTAAGC-
AGCCTCAGGCA
 C G T A A C T G A T G C A C G T A C G T C A G T C G T A C T G A C T A G G T A C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGCTTTAAGC--
TGACCTTTGACCCC
 A C G T A C G T C G T A A C T G A T G C A C G T A C G T C A G T C G T A C T G A C T A G G T A C A C G T A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

TCF7/MA0769.2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGCTTTAAGC-
TCCTTTGATGT
 C G T A A C T G A T G C A C G T A C G T C A G T C G T A C T G A C T A G G T A C A C G T
A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCTTTAAGC
CAGCC------
 A C G T C G T A A C T G A T G C A C G T A C G T C A G T C G T A C T G A C T A G G T A C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGCTTTAAGC--
DGWTTTATGRCN
 C G T A A C T G A T G C A C G T A C G T C A G T C G T A C T G A C T A G G T A C A C G T A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

THRB/MA1574.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGCTTTAAGC--
NTGACCTTTGACCCC
 A C G T A C G T A C G T C G T A A C T G A T G C A C G T A C G T C A G T C G T A C T G A C T A G G T A C A C G T A C G T
T C G A G A C T T C A G T G C A G T A C G T A C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C