Information for 4-GATGCTTATT (Motif 4)

A C T G G T C A C G A T A C T G A G T C A C G T A C G T C G T A A G C T A C G T
Reverse Opposite:
C G T A C T G A A C G T C G T A C G T A A C T G G T A C C G T A C A G T G T A C
p-value:1e-7
log p-value:-1.654e+01
Information Content per bp:1.869
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif14.58%
Number of Background Sequences with motif315.5
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets426.4 +/- 359.5bp
Average Position of motif in Background424.5 +/- 294.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP3/MA0850.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GATGCTTATT
--TGTTTAC-
 A C T G G T C A C G A T A C T G A G T C A C G T A C G T C G T A A G C T A C G T
A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GATGCTTATT-
--TGTTTATTT
 A C T G G T C A C G A T A C T G A G T C A C G T A C G T C G T A A G C T A C G T A C G T
A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

Foxq1/MA0040.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GATGCTTATT
TATTGTTTATT
 A C G T A C T G G T C A C G A T A C T G A G T C A C G T A C G T C G T A A G C T A C G T
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GATGCTTATT-
-ATGAATATTC
 A C T G G T C A C G A T A C T G A G T C A C G T A C G T C G T A A G C T A C G T A C G T
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

FOXG1/MA0613.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GATGCTTATT
-TTGTTTAC-
 A C T G G T C A C G A T A C T G A G T C A C G T A C G T C G T A A G C T A C G T
A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GATGCTTATT-
ATTATGCTAATTT
 A C G T A C G T A C T G G T C A C G A T A C T G A G T C A C G T A C G T C G T A A G C T A C G T A C G T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GATGCTTATT
--TGTTTAC-
 A C T G G T C A C G A T A C T G A G T C A C G T A C G T C G T A A G C T A C G T
A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GATGCTTATT--
--AGCTCATTAT
 A C T G G T C A C G A T A C T G A G T C A C G T A C G T C G T A A G C T A C G T A C G T A C G T
A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GATGCTTATT---
-NTGTTTAYATWW
 A C T G G T C A C G A T A C T G A G T C A C G T A C G T C G T A A G C T A C G T A C G T A C G T A C G T
A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Foxf1/MA1606.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GATGCTTATT-
NNTGTTTACAN
 A C T G G T C A C G A T A C T G A G T C A C G T A C G T C G T A A G C T A C G T A C G T
G C A T G A C T C G A T T C A G G A C T C G A T C G A T G T C A A G T C G C T A G C A T