Information for 1-AGAAGGTAAA (Motif 1)

C G T A C T A G C G T A C G T A C T A G A C T G A G C T C G T A C G T A G T C A
Reverse Opposite:
C A G T A C G T A C G T T C G A G T A C A G T C C G A T C G A T A G T C A C G T
p-value:1e-9
log p-value:-2.216e+01
Information Content per bp:1.848
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif922.2
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets426.6 +/- 281.0bp
Average Position of motif in Background451.4 +/- 320.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGAAGGTAAA---
--CAGGTAAGTAT
 C G T A C T A G C G T A C G T A C T A G A C T G A G C T C G T A C G T A G T C A A C G T A C G T A C G T
A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGAAGGTAAA--
--AAAGTAAACA
 C G T A C T A G C G T A C G T A C T A G A C T G A G C T C G T A C G T A G T C A A C G T A C G T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGAAGGTAAA--
--AAAGTAAACA
 C G T A C T A G C G T A C G T A C T A G A C T G A G C T C G T A C G T A G T C A A C G T A C G T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

PB0018.1_Foxk1_1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGAAGGTAAA-------
AAAATGTAAACAAACAG
 C G T A C T A G C G T A C G T A C T A G A C T G A G C T C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

NR2F2/MA1111.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGAAGGTAAA-
CAAAGGTCAAA
 C G T A C T A G C G T A C G T A C T A G A C T G A G C T C G T A C G T A G T C A A C G T
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

Foxj3/MA0851.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGAAGGTAAA-------
AAAAAGTAAACAAACAC
 C G T A C T A G C G T A C G T A C T A G A C T G A G C T C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGAAGGTAAA-------
AAAAAGTAAACAAACAC
 C G T A C T A G C G T A C G T A C T A G A C T G A G C T C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0015.1_Foxa2_1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGAAGGTAAA-------
AAAAAGTAAACAAAGAC
 C G T A C T A G C G T A C G T A C T A G A C T G A G C T C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGAAGGTAAA--
--WAAGTAAAYA
 C G T A C T A G C G T A C G T A C T A G A C T G A G C T C G T A C G T A G T C A A C G T A C G T
A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

Foxl2/MA1607.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGAAGGTAAA----
AATATGTAAACAAA
 C G T A C T A G C G T A C G T A C T A G A C T G A G C T C G T A C G T A G T C A A C G T A C G T A C G T A C G T
C T G A C G T A C G A T C G T A C G A T C T A G C G A T G T C A G C T A C T G A G A T C G C T A G C T A T C G A