Information for 5-CGCTCGGCGG (Motif 5)

A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A G T C A G T C A C T G C G T A A C T G A G T C A C T G
p-value:1e-1
log p-value:-3.658e+00
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif16.33%
Number of Background Sequences with motif3103.2
Percentage of Background Sequences with motif7.36%
Average Position of motif in Targets620.4 +/- 242.5bp
Average Position of motif in Background679.4 +/- 290.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.88
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGCTCGGCGG----
--BTKGGCGGGAAA
 A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGCTCGGCGG
-GCTCCG---
 A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G T C A C T G A C T G
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCTCGGCGG------
NAGANTGGCGGGGNGNA
 A C G T A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGCTCGGCGG
NGCTN-----
 A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G T C A C T G A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGCTCGGCGG----
--CHCAGCRGGRGG
 A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGCTCGGCGG-
-GCTCGGSCTC
 A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G T C A C T G A C T G A C G T
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGCTCGGCGG-------
AGCTCGGCGCCAAAAGC
 A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGCTCGGCGG-
-DCTCAGCAGG
 A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G T C A C T G A C T G A C G T
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCTCGGCGG---
CTCCCTGGGAGGCCN
 A C G T A C G T A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGCTCGGCGG-------
CCTTCGGCGCCAAAAGG
 A G T C A C T G A G T C A C G T A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G