Information for 3-CCTGTCCGAC (Motif 3)

G T A C A G T C A C G T A T C G A C G T A G T C A G T C A C T G G T C A A G T C
Reverse Opposite:
A C T G A C G T A G T C C T A G C T A G T G C A A T G C C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.718e+01
Information Content per bp:1.867
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif272.1
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets483.4 +/- 317.1bp
Average Position of motif in Background539.6 +/- 339.4bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCTGTCCGAC
GCTGTG----
 G T A C A G T C A C G T A T C G A C G T A G T C A G T C A C T G G T C A A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

MYOD1/MA0499.2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTCCGAC
CAGCACCTGTCCC--
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C A C G T A T C G A C G T A G T C A G T C A C T G G T C A A G T C
A T G C C G T A T A C G T A G C C T G A A T G C T A G C A G C T A T C G A G C T A G T C G T A C A G T C A C G T A C G T

ZNF75D/MA1601.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCTGTCCGAC--
--TTTCCCACAN
 G T A C A G T C A C G T A T C G A C G T A G T C A G T C A C T G G T C A A G T C A C G T A C G T
A C G T A C G T G A C T A G C T C A G T T A G C G T A C A G T C C T G A A G T C G T C A A G C T

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGTCCGAC
GCACACCTGKNC---
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C A C G T A T C G A C G T A G T C A G T C A C T G G T C A A G T C
T C A G A T G C G C T A A G T C C G T A A G T C A G T C A C G T C T A G A C G T T G A C G A T C A C G T A C G T A C G T

SNAI2/MA0745.2/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTCCGAC
ATGCACCTGTCAT--
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C A C G T A T C G A C G T A G T C A G T C A C T G G T C A A G T C
T C G A A G C T T C A G G A T C C T G A A T G C A T G C A G C T T A C G A G C T G T A C T C G A A G C T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGTCCGAC
RYHYACCTGB-----
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C A C G T A T C G A C G T A G T C A G T C A C T G G T C A A G T C
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Rbpjl/MA1621.1/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CCTGTCCGAC
CGAACACCTGTCCC--
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C A C G T A T C G A C G T A G T C A G T C A C T G G T C A A G T C
A T G C T C A G T G C A T C G A G T A C C T G A A T G C T A G C A G C T A T C G A G C T A T G C G A T C A G T C A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCTGTCCGAC----
-CTGTCTGTCACCT
 G T A C A G T C A C G T A T C G A C G T A G T C A G T C A C T G G T C A A G T C A C G T A C G T A C G T A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCTGTCCGAC-
AGGTGHCAGACA
 A C G T G T A C A G T C A C G T A T C G A C G T A G T C A G T C A C T G G T C A A G T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTCCGAC
ACACACCTGTGC---
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C A C G T A T C G A C G T A G T C A G T C A C T G G T C A A G T C
T C G A T G A C T C G A T G A C C G T A A T G C T A G C A C G T A C T G A G C T A C T G G A T C A C G T A C G T A C G T