Information for 3-KGRACGCTAC (Motif 3)

A C G T A C T G C T G A C G T A A G T C A C T G A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G A G T C A C T G A C G T A G C T G T A C T G C A
p-value:1e-5
log p-value:-1.205e+01
Information Content per bp:1.875
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif103.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets449.6 +/- 159.9bp
Average Position of motif in Background683.5 +/- 251.5bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:KGRACGCTAC-------
-ACATGCTACCTAATAC
 A C G T A C T G C T G A C G T A A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

OSR1/MA1542.1/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:KGRACGCTAC----
----TGCTACTGTT
 A C G T A C T G C T G A C G T A A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:KGRACGCTAC-------
-ACTTGCTACCTACACC
 A C G T A C T G C T G A C G T A A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:KGRACGCTAC-------
-CNNNGCTACTGTANNN
 A C G T A C T G C T G A C G T A A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:KGRACGCTAC-------
-TNNTGCTACTGTNNNN
 A C G T A C T G C T G A C G T A A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--KGRACGCTAC--
GTGCCACGCGACTG
 A C G T A C G T A C G T A C T G C T G A C G T A A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:KGRACGCTAC
----NGCTN-
 A C G T A C T G C T G A C G T A A G T C A C T G A G T C A C G T C G T A A G T C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-KGRACGCTAC
TBGCACGCAA-
 A C G T A C G T A C T G C T G A C G T A A G T C A C T G A G T C A C G T C G T A A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

DMRTA2/MA1478.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:KGRACGCTAC---
-AATTGTTACATT
 A C G T A C T G C T G A C G T A A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T
A C G T G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:KGRACGCTAC-
-----GCTCCG
 A C G T A C T G C T G A C G T A A G T C A C T G A G T C A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G