Information for 2-TTTTGCAGGA (Motif 2)

C G A T A G C T A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A C T G A G T C C G T A C G T A C T G A C G T A
p-value:1e-6
log p-value:-1.487e+01
Information Content per bp:1.924
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif14.58%
Number of Background Sequences with motif412.6
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets555.1 +/- 331.7bp
Average Position of motif in Background482.5 +/- 302.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTTTGCAGGA--
NNNCTTTCCAGGAAA
 A C G T A C G T A C G T C G A T A G C T A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

POU5F1/MA1115.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGCAGGA
NATTTGCATNN
 A C G T C G A T A G C T A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGCAGGA-
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T C G A T A G C T A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTTTGCAGGA--
-TTTCCAGGAAA
 C G A T A G C T A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T
A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTTGCAGGA---
-TTTCCNGGAAAN
 C G A T A G C T A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T A C G T
A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

E2F8/MA0865.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTTGCAGGA--
TTTGGCGGGAAA
 C G A T A G C T A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTTGCAGGA---
NATTTCCNGGAAAT
 A C G T C G A T A G C T A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.64
Offset:-9
Orientation:forward strand
Alignment:---------TTTTGCAGGA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

E2F7/MA0758.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGCAGGA---
TTTTGGCGGGAAAA
 A C G T C G A T A G C T A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T A C G T
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTTTGCAGGA
ATTTGCATAA
 C G A T A G C T A C G T A C G T A C T G A G T C C G T A A C T G C T A G C G T A
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A