Information for 9-GCGCGGTGCC (Motif 9)

A C T G G T A C A T C G A G T C C T A G A C T G C G A T C T A G A T G C A T G C
Reverse Opposite:
A T C G T A C G A G T C G C T A A G T C G A T C A C T G A T G C A C T G T G A C
p-value:1e-4
log p-value:-9.214e+00
Information Content per bp:1.769
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif13.04%
Number of Background Sequences with motif689.8
Percentage of Background Sequences with motif1.62%
Average Position of motif in Targets598.2 +/- 251.9bp
Average Position of motif in Background620.7 +/- 312.9bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX(var.2)/MA1528.1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCGCGGTGCC---
GTTGGCACGGTGCCAGG
 A C G T A C G T A C G T A C G T A C T G G T A C A T C G A G T C C T A G A C T G C G A T C T A G A T G C A T G C A C G T A C G T A C G T
A T C G G C A T A C G T A C T G A C T G G T A C C T G A A G T C A T C G C A T G G A C T A C T G A G T C A G T C G T C A C T A G A T C G

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCGCGGTGCC
GGGGGCGGGGCC
 A C G T A C G T A C T G G T A C A T C G A G T C C T A G A C T G C G A T C T A G A T G C A T G C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

ZBTB14/MA1650.1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCGCGGTGCC
GNGTGCGCGGGN--
 A C G T A C G T A C G T A C G T A C T G G T A C A T C G A G T C C T A G A C T G C G A T C T A G A T G C A T G C
T A C G A T C G T A C G A C G T A T C G A T G C T A C G A T G C T A C G A T C G T A C G A T C G A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCGCGGTGCC-
GCCGCGCAGTGCGT
 A C G T A C G T A C G T A C T G G T A C A T C G A G T C C T A G A C T G C G A T C T A G A T G C A T G C A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCGCGGTGCC-
TTGGCATGGTGCCA
 A C G T A C G T A C G T A C T G G T A C A T C G A G T C C T A G A C T G C G A T C T A G A T G C A T G C A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NFIC(var.2)/MA1527.1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCGCGGTGCC---
GTTGGCACGGTGCCAAC
 A C G T A C G T A C G T A C G T A C T G G T A C A T C G A G T C C T A G A C T G C G A T C T A G A T G C A T G C A C G T A C G T A C G T
A T C G G A C T A C G T A C T G A T C G G T A C C T G A A G T C T A C G T C A G G A C T A C T G A T G C G T A C C G T A C T G A A T G C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCGCGGTGCC
--GCTGTG--
 A C T G G T A C A T C G A G T C C T A G A C T G C G A T C T A G A T G C A T G C
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCGCGGTGCC
GGCGCGCT---
 A C G T A C T G G T A C A T C G A G T C C T A G A C T G C G A T C T A G A T G C A T G C
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCGCGGTGCC
GGGCGGGACC
 A C T G G T A C A T C G A G T C C T A G A C T G C G A T C T A G A T G C A T G C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCGCGGTGCC
---CGGAGC-
 A C T G G T A C A T C G A G T C C T A G A C T G C G A T C T A G A T G C A T G C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T