Information for 7-TATTTGTAAG (Motif 7)

A C G T G T C A C G A T A C G T A C G T A C T G A C G T C G T A C G T A C T A G
Reverse Opposite:
A G T C A C G T A C G T G T C A A G T C C G T A G T C A C G T A A C G T C G T A
p-value:1e-4
log p-value:-1.146e+01
Information Content per bp:1.879
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif8.70%
Number of Background Sequences with motif121.3
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets361.0 +/- 163.2bp
Average Position of motif in Background459.4 +/- 291.7bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TATTTGTAAG--
CTATAATTGTTAGCG
 A C G T A C G T A C G T A C G T G T C A C G A T A C G T A C G T A C T G A C G T C G T A C G T A C T A G A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

MEF2A/MA0052.4/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TATTTGTAAG-
NNTCTATTTTTAGNN
 A C G T A C G T A C G T A C G T A C G T G T C A C G A T A C G T A C G T A C T G A C G T C G T A C G T A C T A G A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

LHX2/MA0700.2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TATTTGTAAG
NNTAATTGGNN-
 A C G T A C G T A C G T G T C A C G A T A C G T A C G T A C T G A C G T C G T A C G T A C T A G
C G T A G C A T C G A T C G T A G C T A C G A T C G A T C T A G T A C G G C A T G C A T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TATTTGTAAG----
NNNTTTNTAATACNG
 A C G T A C G T G T C A C G A T A C G T A C G T A C T G A C G T C G T A C G T A C T A G A C G T A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TATTTGTAAG
KCTATTTTTRGH
 A C G T A C G T A C G T G T C A C G A T A C G T A C G T A C T G A C G T C G T A C G T A C T A G
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MSX2/MA0708.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TATTTGTAAG
NTAATTGG---
 A C G T A C G T G T C A C G A T A C G T A C G T A C T G A C G T C G T A C G T A C T A G
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TATTTGTAAG
NTAATTGN---
 A C G T A C G T G T C A C G A T A C G T A C G T A C T G A C G T C G T A C G T A C T A G
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TATTTGTAAG--
TTCTATTTTTAGNNN
 A C G T A C G T A C G T A C G T G T C A C G A T A C G T A C G T A C T G A C G T C G T A C G T A C T A G A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PH0082.1_Irx2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TATTTGTAAG---
TAAATACATGTAAAATT
 A C G T A C G T A C G T A C G T A C G T G T C A C G A T A C G T A C G T A C T G A C G T C G T A C G T A C T A G A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TATTTGTAAG
GCTATTTTTAGC
 A C G T A C G T A C G T G T C A C G A T A C G T A C G T A C T G A C G T C G T A C G T A C T A G
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C