Information for 11-GGTTAGTATC (Motif 11)

A C T G A C T G A C G T A C G T T G C A A C T G C G A T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T G C T A A G T C A C G T C G T A C G T A A G T C A G T C
p-value:1e-2
log p-value:-4.751e+00
Information Content per bp:1.938
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif127.1
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets585.6 +/- 184.4bp
Average Position of motif in Background549.4 +/- 238.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGTTAGTATC
CAGGTAAGTAT-
 A C G T A C G T A C T G A C T G A C G T A C G T T G C A A C T G C G A T C G T A A C G T A G T C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGTTAGTATC--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T T G C A A C T G C G A T C G T A A C G T A G T C A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGTTAGTATC--
NNAGATNVNWATCTN
 A C G T A C G T A C G T A C T G A C T G A C G T A C G T T G C A A C T G C G A T C G T A A C G T A G T C A C G T A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGTTAGTATC--
RGTTAGTGCCCY
 A C T G A C T G A C G T A C G T T G C A A C T G C G A T C G T A A C G T A G T C A C G T A C G T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

PB0036.1_Irf6_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTTAGTATC------
NNNTTGGTTTCGNTNNN
 A C G T A C T G A C T G A C G T A C G T T G C A A C T G C G A T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GGTTAGTATC----
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T T G C A A C T G C G A T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

PB0125.1_Gata3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GGTTAGTATC-------
NNNNNCGATANNATCTNNNNAN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T T G C A A C T G C G A T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGTTAGTATC
GGTTGGCAT-
 A C T G A C T G A C G T A C G T T G C A A C T G C G A T C G T A A C G T A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

NR1D2/MA1532.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGTTAGTATC----
GGGTTAGTGGGTCAT
 A C G T A C T G A C T G A C G T A C G T T G C A A C T G C G A T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
T C A G C A T G C A T G A C G T G A C T C G T A A T C G A C G T C T A G C A T G C T A G C A G T A G T C C T G A C A G T

DMRT3/MA0610.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGTTAGTATC---
--AATGTATCAAT
 A C T G A C T G A C G T A C G T T G C A A C T G C G A T C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T