Information for 10-CCGGCCGGCG (Motif 10)

A G T C G T A C A T C G A T C G T A G C A G T C A C T G A T C G A G T C A C T G
Reverse Opposite:
T G A C T C A G T A G C T G A C A C T G A T C G T A G C A T G C A C T G A C T G
p-value:1e-2
log p-value:-6.736e+00
Information Content per bp:1.823
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif17.39%
Number of Background Sequences with motif1979.3
Percentage of Background Sequences with motif4.66%
Average Position of motif in Targets808.8 +/- 66.0bp
Average Position of motif in Background683.8 +/- 274.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.2/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCGGCCGGCG
NNTTCCCGCCNNN-
 A C G T A C G T A C G T A C G T A G T C G T A C A T C G A T C G T A G C A G T C A C T G A T C G A G T C A C T G
A T G C A G T C A G C T A G C T A T G C T A G C G A T C C A T G A T G C A G T C G A T C A G T C A T G C A C G T

KLF15/MA1513.1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCGGCCGGCG
GCCCCGCCCCC--
 A C G T A C G T A C G T A G T C G T A C A T C G A T C G T A G C A G T C A C T G A T C G A G T C A C T G
A T C G A T G C T A G C T A G C A T G C A C T G G A T C T A G C T A G C A T G C A T G C A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCGGCCGGCG
TTCCCGCCWG--
 A C G T A C G T A G T C G T A C A T C G A T C G T A G C A G T C A C T G A T C G A G T C A C T G
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCGGCCGGCG----
CAGGCCNNGGCCNN
 A G T C G T A C A T C G A T C G T A G C A G T C A C T G A T C G A G T C A C T G A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCGGCCGGCG
TGCCCCCGGGCA
 A C G T A C G T A G T C G T A C A T C G A T C G T A G C A G T C A C T G A T C G A G T C A C T G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCGGCCGGCG
--GGCGCGCT
 A G T C G T A C A T C G A T C G T A G C A G T C A C T G A T C G A G T C A C T G
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCGGCCGGCG--
-NNGCAGGTGNN
 A G T C G T A C A T C G A T C G T A G C A G T C A C T G A T C G A G T C A C T G A C G T A C G T
A C G T T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCGGCCGGCG
CTAGGCCT---
 A C G T A G T C G T A C A T C G A T C G T A G C A G T C A C T G A T C G A G T C A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCGGCCGGCG---
NCCCCCCCGGGGGGN
 A C G T A C G T A G T C G T A C A T C G A T C G T A G C A G T C A C T G A T C G A G T C A C T G A C G T A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CCGGCCGGCG--
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A T C G A T C G T A G C A G T C A C T G A T C G A G T C A C T G A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G