Information for 1-CAAAACCGAK (Motif 1)

A G T C T C G A G T C A C T G A T C G A T G A C G T A C C A T G G C T A A C T G
Reverse Opposite:
G T A C C G A T G T A C C A T G A C T G A G C T A G C T A C G T A G C T T C A G
p-value:1e-8
log p-value:-1.843e+01
Information Content per bp:1.667
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif41.30%
Number of Background Sequences with motif3978.5
Percentage of Background Sequences with motif9.36%
Average Position of motif in Targets436.2 +/- 297.6bp
Average Position of motif in Background469.7 +/- 308.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----CAAAACCGAK--
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T A G T C T C G A G T C A C T G A T C G A T G A C G T A C C A T G G C T A A C T G A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Prdm15/MA1616.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAAAACCGAK---
AGGAAAACCTGGAGC
 A C G T A C G T A G T C T C G A G T C A C T G A T C G A T G A C G T A C C A T G G C T A A C T G A C G T A C G T A C G T
C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAAAACCGAK---
GCAAAACATTACTA
 A C G T A G T C T C G A G T C A C T G A T C G A T G A C G T A C C A T G G C T A A C T G A C G T A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CAAAACCGAK
ATAAACCGAAACCAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A G T C A C T G A T C G A T G A C G T A C C A T G G C T A A C T G
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAAAACCGAK
CGTATCGAAACCAAA
 A C G T A C G T A C G T A C G T A C G T A G T C T C G A G T C A C T G A T C G A T G A C G T A C C A T G G C T A A C T G
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0036.1_Irf6_1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAAAACCGAK--
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A C G T A C G T A G T C T C G A G T C A C T G A T C G A T G A C G T A C C A T G G C T A A C T G A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

IRF5/MA1420.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAAAACCGAK---
CCGAAACCGAAACT
 A C G T A G T C T C G A G T C A C T G A T C G A T G A C G T A C C A T G G C T A A C T G A C G T A C G T A C G T
G A T C A G T C C A T G C G T A G C T A C T G A G A T C A G T C T C A G T G C A C G T A G T C A T G A C A G C T

GRHL1/MA0647.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAAAACCGAK---
-AAAACCGGTTTT
 A G T C T C G A G T C A C T G A T C G A T G A C G T A C C A T G G C T A A C T G A C G T A C G T A C G T
A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAAAACCGAK------
-AAAACCTGGANHGGR
 A G T C T C G A G T C A C T G A T C G A T G A C G T A C C A T G G C T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A T C G A T C G A A G T C T G A C G A C T A C T G C T A G G T C A T A G C G C A T T C A G C T A G T C A G

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CAAAACCGAK
CAAAATCGAAACTAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A G T C A C T G A T C G A T G A C G T A C C A T G G C T A A C T G
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T