Information for 9-TAATATTARC (Motif 9)

A C G T C G T A C G T A A C G T C G T A A C G T A C G T C G T A C T G A G T A C
Reverse Opposite:
A C T G A G C T C G A T C G T A C G T A A C G T C G T A A C G T C G A T C G T A
p-value:1e-4
log p-value:-9.837e+00
Information Content per bp:1.888
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif12.77%
Number of Background Sequences with motif585.0
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets460.0 +/- 287.8bp
Average Position of motif in Background423.0 +/- 225.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----TAATATTARC
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C G T C G T A C T G A G T A C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----TAATATTARC
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C G T C G T A C T G A G T A C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TAATATTARC---
--ATATTTACATA
 A C G T C G T A C G T A A C G T C G T A A C G T A C G T C G T A C T G A G T A C A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAATATTARC--
AATATTAATAAAGA
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C G T C G T A C T G A G T A C A C G T A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TAATATTARC---
--ATATTTACATA
 A C G T C G T A C G T A A C G T C G T A A C G T A C G T C G T A C T G A G T A C A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

Mecom/MA0029.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAATATTARC--
TNTTATCTTATCTT
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C G T C G T A C T G A G T A C A C G T A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

GATA1/MA0035.4/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAATATTARC-
NNAGATTAGAN
 A C G T C G T A C G T A A C G T C G T A A C G T A C G T C G T A C T G A G T A C A C G T
C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A

Arid3b/MA0601.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TAATATTARC---
--ATATTAATTAA
 A C G T C G T A C G T A A C G T C G T A A C G T A C G T C G T A C T G A G T A C A C G T A C G T A C G T
A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PB0069.1_Sox21_1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TAATATTARC-
TTTAATTATAATTAAG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C G T C G T A C T G A G T A C A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TAATATTARC--
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C G T C G T A C T G A G T A C A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G