Information for 6-AGGAACTCCC (Motif 6)

C G T A T A C G A C T G C G T A C G T A A T G C A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G C T A G A C T G G T C A A T C G A C G T A C G T A G T C A T G C A C G T
p-value:1e-5
log p-value:-1.240e+01
Information Content per bp:1.900
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif14.89%
Number of Background Sequences with motif577.6
Percentage of Background Sequences with motif1.40%
Average Position of motif in Targets458.3 +/- 179.4bp
Average Position of motif in Background562.4 +/- 321.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AGGAACTCCC-
-GGAAANCCCC
 C G T A T A C G A C T G C G T A C G T A A T G C A C G T A G T C A G T C A G T C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGGAACTCCC--
GGGAAATCCCCN
 C G T A T A C G A C T G C G T A C G T A A T G C A C G T A G T C A G T C A G T C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGGAACTCCC-
-GGAAATCCCC
 C G T A T A C G A C T G C G T A C G T A A T G C A C G T A G T C A G T C A G T C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGGAACTCCC-
-GGAAATTCCC
 C G T A T A C G A C T G C G T A C G T A A T G C A C G T A G T C A G T C A G T C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGGAACTCCC
ANCAGGAAGT---
 A C G T A C G T A C G T C G T A T A C G A C T G C G T A C G T A A T G C A C G T A G T C A G T C A G T C
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGGAACTCCC-
-GGAAATTCCC
 C G T A T A C G A C T G C G T A C G T A A T G C A C G T A G T C A G T C A G T C A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGGAACTCCC
NACAGGAAAT---
 A C G T A C G T A C G T C G T A T A C G A C T G C G T A C G T A A T G C A C G T A G T C A G T C A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGAACTCCC
ATGAACTTT-
 C G T A T A C G A C T G C G T A C G T A A T G C A C G T A G T C A G T C A G T C
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T

RELB/MA1117.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGGAACTCCC---
--GAATTCCCCGG
 C G T A T A C G A C T G C G T A C G T A A T G C A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T C T A G C T G A C G T A C G A T G A C T G A T C G T A C G T A C T A G C C A T G T A C G

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGGAACTCCC
AVCAGGAAGT---
 A C G T A C G T A C G T C G T A T A C G A C T G C G T A C G T A A T G C A C G T A G T C A G T C A G T C
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T