Information for 2-CGCACCGAGA (Motif 2)

A G T C A C T G G T A C G C T A A T G C A T G C A C T G C G T A A C T G G T C A
Reverse Opposite:
A C G T A G T C A C G T A G T C T A C G A T C G C G A T A C T G A G T C A C T G
p-value:1e-7
log p-value:-1.714e+01
Information Content per bp:1.861
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif17.02%
Number of Background Sequences with motif436.3
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets679.7 +/- 196.2bp
Average Position of motif in Background642.1 +/- 288.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGCACCGAGA-----
GNNACCGAGAATNNN
 A G T C A C T G G T A C G C T A A T G C A T G C A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGCACCGAGA-----
NNNACCGAGAGTNNN
 A G T C A C T G G T A C G C T A A T G C A T G C A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGCACCGAGA-----
TTGACCGAGAATTCC
 A G T C A C T G G T A C G C T A A T G C A T G C A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGCACCGAGA---
-RHHCAGAGAGGB
 A G T C A C T G G T A C G C T A A T G C A T G C A C T G C G T A A C T G G T C A A C G T A C G T A C G T
A C G T T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

IRF6/MA1509.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGCACCGAGA--
---ACCGAAACT
 A G T C A C T G G T A C G C T A A T G C A T G C A C T G C G T A A C T G G T C A A C G T A C G T
A C G T A C G T A C G T T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGCACCGAGA
GCGGACCBWA-
 A C G T A G T C A C T G G T A C G C T A A T G C A T G C A C T G C G T A A C T G G T C A
A T C G G T A C A C T G A C T G G T C A A T G C A T G C A T G C G C T A T C G A A C G T

ZBTB14/MA1650.1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CGCACCGAGA
CCCCGCGCACCC---
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G G T A C G C T A A T G C A T G C A C T G C G T A A C T G G T C A
T A G C A T G C T A G C A T G C T A C G A T G C T A C G T A G C T G C A A T G C T A G C A T G C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGCACCGAGA
-GCTCCG---
 A G T C A C T G G T A C G C T A A T G C A T G C A C T G C G T A A C T G G T C A
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGCACCGAGA-----
CGTATCGAAACCAAA
 A G T C A C T G G T A C G C T A A T G C A T G C A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGCACCGAGA--
GCCGCGCAGTGCGT
 A C G T A C G T A G T C A C T G G T A C G C T A A T G C A T G C A C T G C G T A A C T G G T C A A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T