Information for 3-CATG (Motif 13)

A G T C C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G
p-value:1e0
log p-value:-7.825e-01
Information Content per bp:1.530
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif85.11%
Number of Background Sequences with motif34410.9
Percentage of Background Sequences with motif83.22%
Average Position of motif in Targets521.3 +/- 292.9bp
Average Position of motif in Background502.4 +/- 329.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CATG----
NNCATGTGNN
A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C

PH0086.1_Irx5/Jaspar

Match Rank:2
Score:0.75
Offset:-7
Orientation:reverse strand
Alignment:-------CATG------
ANTNNTACATGTANNTN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------CATG-------
AAAATACATGTAATACT
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.73
Offset:-7
Orientation:reverse strand
Alignment:-------CATG------
ANTNTTACATGTATNTA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0084.1_Irx3_2/Jaspar

Match Rank:5
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------CATG-------
AATATACATGTAATATA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.72
Offset:-7
Orientation:reverse strand
Alignment:-------CATG------
NNTTTTACATGTANNNT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.70
Offset:-7
Orientation:reverse strand
Alignment:-------CATG------
ANTTNTACATGTANTTN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CATG---
NCGTGACN
A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

USF2/MA0526.3/Jaspar

Match Rank:9
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CATG----
NNGTCACATGACNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

USF1/MA0093.3/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CATG------
TGGTCATGTGACCT
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T A G T C A G A G C T T A G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G A C T