Information for 1-ACGC (Motif 11)

C G T A A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C G T
p-value:1e0
log p-value:-8.415e-01
Information Content per bp:1.530
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif82.98%
Number of Background Sequences with motif33368.2
Percentage of Background Sequences with motif80.70%
Average Position of motif in Targets668.5 +/- 250.8bp
Average Position of motif in Background616.2 +/- 298.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)3.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-ACGC-
CACGCA
 A C G T C G T A A G T C A C T G A G T C A C G T
A G T C C G T A G T A C C T A G G T A C C T G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----ACGC--
TBGCACGCAA
 A C G T A C G T A C G T A C G T C G T A A G T C A C T G A G T C A C G T A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PB0143.1_Klf7_2/Jaspar

Match Rank:3
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------ACGC-------
AAGCATACGCCCAACTT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

KLF6/MA1517.1/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ACGC---
GGCCACGCCCA
 A C G T A C G T A C G T A C G T C G T A A G T C A C T G A G T C A C G T A C G T A C G T
A T C G T C A G T G A C T G A C G T C A A G T C C T A G A G T C T A G C G T A C G T C A

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------ACGC-----
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PAX5/MA0014.3/Jaspar

Match Rank:6
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------ACGC--
NNGGTCACGCTC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A G T C A C G T A C G T
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

PB0094.1_Zfp128_1/Jaspar

Match Rank:7
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------ACGC------
TTNGGGTACGCCNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

KLF14/MA0740.1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ACGC------
GGCCACGCCCCCTT
 A C G T A C G T A C G T A C G T C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACGC--
GCACGTNC
 A C G T A C G T C G T A A G T C A C T G A G T C A C G T A C G T
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

TBX3/MA1566.1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ACGC---
NTCACACCTN
 A C G T A C G T A C G T C G T A A G T C A C T G A G T C A C G T A C G T A C G T
A G C T G A C T T A G C T C G A A G T C C T G A A T G C A T G C G A C T G A T C