Information for 2-TTCAAAAAGT (Motif 2)

A C G T C G A T A G T C C G T A G T C A G T C A C T G A C G T A T A C G A C G T
Reverse Opposite:
G T C A A T G C A C G T A G C T A C G T A C G T A C G T C T A G C G T A C G T A
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.853
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif29.17%
Number of Background Sequences with motif1817.8
Percentage of Background Sequences with motif4.03%
Average Position of motif in Targets449.0 +/- 258.7bp
Average Position of motif in Background441.6 +/- 330.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TTCAAAAAGT
NATTCAAAT---
 A C G T A C G T A C G T C G A T A G T C C G T A G T C A G T C A C T G A C G T A T A C G A C G T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAAAGT
CGGTTTCAAA----
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A G T C A G T C A C T G A C G T A T A C G A C G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAAAGT---
ATGGTTCAATAATTTTG
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A G T C A G T C A C T G A C G T A T A C G A C G T A C G T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

ZNF384/MA1125.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTCAAAAAGT-
TTTAAAAAAAAA
 A C G T A C G T C G A T A G T C C G T A G T C A G T C A C T G A C G T A T A C G A C G T A C G T
C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAAAGT-
CAATTGCAAAAATAT
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A G T C A G T C A C T G A C G T A T A C G A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

SCRT1/MA0743.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAAAGT----
AATTCAACAGGTGGTT
 A C G T A C G T A C G T C G A T A G T C C G T A G T C A G T C A C T G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T G A T C G T C A C T G A A T G C G C T A C T A G C T A G G A C T C A T G C A T G A G C T G C A T

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TTCAAAAAGT
AATCAATTCAATAATT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A G T C A G T C A C T G A C G T A T A C G A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTCAAAAAGT---
AAGGTCAAAAGGTCAA
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A G T C A G T C A C T G A C G T A T A C G A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

TCF7/MA0769.2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTCAAAAAGT
ANATCAAAGNN-
 A C G T A C G T A C G T C G A T A G T C C G T A G T C A G T C A C T G A C G T A T A C G A C G T
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTCAAAAAGT
ASATCAAAGG--
 A C G T A C G T A C G T C G A T A G T C C G T A G T C A G T C A C T G A C G T A T A C G A C G T
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T