Information for 3-GATC (Motif 11)

A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C
p-value:1e0
log p-value:-9.187e-01
Information Content per bp:1.530
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif75.00%
Number of Background Sequences with motif32581.9
Percentage of Background Sequences with motif72.16%
Average Position of motif in Targets437.5 +/- 258.2bp
Average Position of motif in Background517.7 +/- 327.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GATC--
NGGATTAN
 A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GATC-
NTATYGATCH
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

PH0016.1_Cux1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GATC-------
TNAGNTGATCAACCGGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GATC---
ATTGATTYND
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GATC-
YSTTATCT
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T

CUX1/MA0754.1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GATC-
NTATCGATTA
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.62
Offset:-9
Orientation:forward strand
Alignment:---------GATC----
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

GATA3/MA0037.3/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GATC-
TCTTATCT
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T
A G C T A T G C G A C T C G A T C G T A A C G T A G T C C G A T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.60
Offset:-9
Orientation:forward strand
Alignment:---------GATC----
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------GATC---
AACCCTTTGATCTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T