Information for 8-CAGCAATAGA (Motif 8)

A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A A C G T A C G T A C T G A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.040e+01
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif1422.9
Percentage of Background Sequences with motif3.39%
Average Position of motif in Targets502.9 +/- 276.5bp
Average Position of motif in Background489.6 +/- 299.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CAGCAATAGA--
AAGCAATAAAAA
 A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T
C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A

HOXD9/MA0913.2/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGCAATAGA--
--GCAATAAAAC
 A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T
A C G T A C G T T C A G A G T C G T C A T C G A C G A T G C T A C G T A C G T A G T C A G A T C

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAGCAATAGA
GAACAATGG-
 A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

CDX4/MA1473.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGCAATAGA--
-GGCAATAAAAC
 A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T
A C G T C A T G T C A G A G T C T G C A C G T A A C G T C G T A C G T A G T C A G T C A A G T C

PB0065.1_Sox15_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAGCAATAGA---
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGCAATAGA
DCYAAAAATAGM
 A C G T A C G T A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CAGCAATAGA---
TNNAGAACAATANATNN
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0073.1_Sox7_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CAGCAATAGA------
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

CDX1/MA0878.2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGCAATAGA--
-GGCCATAAAAC
 A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T
A C G T C A T G C T A G A G T C T G A C C G T A A C G T C T G A C G T A C T G A G T C A A G T C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGCAATAGA
KCCAAAAATAGC
 A C G T A C G T A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C