Information for 6-TAHGGTCTTA (Motif 6)

A C G T C G T A G T C A A T C G A C T G A C G T A G T C A G C T A C G T C G T A
Reverse Opposite:
A C G T C G T A C T G A A C T G C G T A G T A C A T G C C A G T A C G T C G T A
p-value:1e-6
log p-value:-1.382e+01
Information Content per bp:1.839
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif10.42%
Number of Background Sequences with motif151.2
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets456.5 +/- 293.2bp
Average Position of motif in Background386.9 +/- 240.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0066.1_Hoxc11/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAHGGTCTTA------
TAAAGTCGTAAAATAG
 A C G T C G T A G T C A A T C G A C T G A C G T A G T C A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0047.1_Hoxa11/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAHGGTCTTA------
TAAAGTCGTAAAACAT
 A C G T C G T A G T C A A T C G A C T G A C G T A G T C A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAHGGTCTTA------
TAAAGTCGTAAAACGT
 A C G T C G T A G T C A A T C G A C T G A C G T A G T C A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAHGGTCTTA-------
CAAGGTCGTAAAATCTT
 A C G T C G T A G T C A A T C G A C T G A C G T A G T C A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0067.1_Hoxc12/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAHGGTCTTA-------
TTAGGTCGTAAAATTTC
 A C G T C G T A G T C A A T C G A C T G A C G T A G T C A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAHGGTCTTA-------
TAAGGTCGTAAAATCCT
 A C G T C G T A G T C A A T C G A C T G A C G T A G T C A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TAHGGTCTTA---
CTTTAAGTACTTAATG
 A C G T A C G T A C G T A C G T C G T A G T C A A T C G A C T G A C G T A G T C A G C T A C G T C G T A A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TAHGGTCTTA----
GATAACATCCTAGTAG
 A C G T A C G T A C G T C G T A G T C A A T C G A C T G A C G T A G T C A G C T A C G T C G T A A C G T A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PH0117.1_Nkx3-1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TAHGGTCTTA---
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A A T C G A C T G A C G T A G T C A G C T A C G T C G T A A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

HOXD10/MA1506.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TAHGGTCTTA----
---GGTCGTAAAAC
 A C G T C G T A G T C A A T C G A C T G A C G T A G T C A G C T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C