Information for 5-GATCTGTAAA (Motif 5)

C T A G C G T A A C G T A G T C A C G T A C T G G C A T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T C G A T C G T A A G T C C G T A A C T G C G T A C G A T A G T C
p-value:1e-6
log p-value:-1.566e+01
Information Content per bp:1.873
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif14.58%
Number of Background Sequences with motif348.3
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets543.3 +/- 269.3bp
Average Position of motif in Background419.5 +/- 255.4bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GATCTGTAAA---
AAAGACCTGTCAATCC
 A C G T A C G T A C G T C T A G C G T A A C G T A G T C A C G T A C T G G C A T C G T A C G T A C G T A A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GATCTGTAAA-
-ATATGCAAAT
 C T A G C G T A A C G T A G T C A C G T A C T G G C A T C G T A C G T A C G T A A C G T
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

Foxl2/MA1607.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GATCTGTAAA----
AATATGTAAACAAA
 C T A G C G T A A C G T A G T C A C G T A C T G G C A T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C T G A C G T A C G A T C G T A C G A T C T A G C G A T G T C A G C T A C T G A G A T C G C T A G C T A T C G A

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GATCTGTAAA---
AACGAGCTGTCAATAC
 A C G T A C G T A C G T C T A G C G T A A C G T A G T C A C G T A C T G G C A T C G T A C G T A C G T A A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0104.1_Meis2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GATCTGTAAA---
AAAGACCTGTCAATAC
 A C G T A C G T A C G T C T A G C G T A A C G T A G T C A C G T A C T G G C A T C G T A C G T A C G T A A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GATCTGTAAA
GGTCTGGCAT
 C T A G C G T A A C G T A G T C A C G T A C T G G C A T C G T A C G T A C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GATCTGTAAA
AAGGTGTKAA
 C T A G C G T A A C G T A G T C A C G T A C T G G C A T C G T A C G T A C G T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GATCTGTAAA-
-TTATGCAAAT
 C T A G C G T A A C G T A G T C A C G T A C T G G C A T C G T A C G T A C G T A A C G T
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

HAND2/MA1638.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GATCTGTAAA
NNCATCTGNN--
 A C G T A C G T C T A G C G T A A C G T A G T C A C G T A C T G G C A T C G T A C G T A C G T A
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GATCTGTAAA---
AACTAGCTGTCAATAC
 A C G T A C G T A C G T C T A G C G T A A C G T A G T C A C G T A C T G G C A T C G T A C G T A C G T A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C