Information for 7-TAAGGAACTC (Motif 7)

A G C T C T G A C G T A C T A G T A C G C G T A C G T A G T A C C G A T A G T C
Reverse Opposite:
A C T G C G T A A C T G G C A T A C G T A T G C A G T C A C G T G A C T T C G A
p-value:1e-5
log p-value:-1.369e+01
Information Content per bp:1.731
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif17.39%
Number of Background Sequences with motif754.0
Percentage of Background Sequences with motif1.72%
Average Position of motif in Targets615.0 +/- 272.1bp
Average Position of motif in Background485.4 +/- 328.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAAGGAACTC--
-AAGGATATNTN
 A G C T C T G A C G T A C T A G T A C G C G T A C G T A G T A C C G A T A G T C A C G T A C G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

FOXP3/MA0850.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAAGGAACTC
GTAAACA----
 A C G T A G C T C T G A C G T A C T A G T A C G C G T A C G T A G T A C C G A T A G T C
C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAAGGAACTC----------
GAAGTANCACGAATNMRAGT
 A G C T C T G A C G T A C T A G T A C G C G T A C G T A G T A C C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

POU6F2/MA0793.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TAAGGAACTC
NTAATGAGCT-
 A C G T A G C T C T G A C G T A C T A G T A C G C G T A C G T A G T A C C G A T A G T C
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAAGGAACTC
GTAAACAA---
 A C G T A G C T C T G A C G T A C T A G T A C G C G T A C G T A G T A C C G A T A G T C
C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAAGGAACTC
ANCAGGAAGT-
 A C G T A G C T C T G A C G T A C T A G T A C G C G T A C G T A G T A C C G A T A G T C
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T

FOXD1/MA0031.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAAGGAACTC
GTAAACAT---
 A C G T A G C T C T G A C G T A C T A G T A C G C G T A C G T A G T A C C G A T A G T C
A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T A C G T A C G T A C G T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAAGGAACTC
ATAATGAGGT-
 A C G T A G C T C T G A C G T A C T A G T A C G C G T A C G T A G T A C C G A T A G T C
C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TAAGGAACTC
GTAAACAA---
 A C G T A G C T C T G A C G T A C T A G T A C G C G T A C G T A G T A C C G A T A G T C
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T

FOXN3/MA1489.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TAAGGAACTC
GTAAACAA---
 A C G T A G C T C T G A C G T A C T A G T A C G C G T A C G T A G T A C C G A T A G T C
A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T