Information for 1-GAGTATATGG (Motif 1)

A C T G C G T A A C T G G A C T C G T A A C G T C G T A A C G T A C T G C T A G
Reverse Opposite:
A G T C A G T C C G T A C G A T C G T A C G A T C T G A A G T C A C G T G T A C
p-value:1e-8
log p-value:-2.030e+01
Information Content per bp:1.873
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif17.39%
Number of Background Sequences with motif313.3
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets371.5 +/- 355.0bp
Average Position of motif in Background445.1 +/- 438.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHE22/MA0818.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GAGTATATGG-
-ANCATATGGT
 A C T G C G T A A C T G G A C T C G T A A C G T C G T A A C G T A C T G C T A G A C G T
A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

OLIG3/MA0827.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GAGTATATGG-
-ANCATATGGT
 A C T G C G T A A C T G G A C T C G T A A C G T C G T A A C G T A C T G C T A G A C G T
A C G T C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

OLIG2/MA0678.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GAGTATATGG-
-ACCATATGGT
 A C T G C G T A A C T G G A C T C G T A A C G T C G T A A C G T A C T G C T A G A C G T
A C G T C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T

OLIG1/MA0826.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GAGTATATGG-
-AACATATGTT
 A C T G C G T A A C T G G A C T C G T A A C G T C G T A A C G T A C T G C T A G A C G T
A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

NEUROD2/MA0668.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GAGTATATGG-
-ACCATATGGC
 A C T G C G T A A C T G G A C T C G T A A C G T C G T A A C G T A C T G C T A G A C G T
A C G T C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C

BHLHE23/MA0817.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAGTATATGG--
AAACATATGTTT
 A C T G C G T A A C T G G A C T C G T A A C G T C G T A A C G T A C T G C T A G A C G T A C G T
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

Atoh1/MA0461.2/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAGTATATGG-
-AACATATGTT
 A C T G C G T A A C T G G A C T C G T A A C G T C G T A A C G T A C T G C T A G A C G T
A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

ATOH7/MA1468.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAGTATATGG-
-AACATATGTC
 A C T G C G T A A C T G G A C T C G T A A C G T C G T A A C G T A C T G C T A G A C G T
A C G T T C G A T G C A A G T C C T G A A G C T T G C A A C G T A C T G A C G T G A T C

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAGTATATGG--
CACCATATGGCG
 A C T G C G T A A C T G G A C T C G T A A C G T C G T A A C G T A C T G C T A G A C G T A C G T
A G T C C T G A T A G C T A G C C T G A A C G T T C G A G A C T C A T G A C T G G A T C T C A G

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GAGTATATGG
--ACATATGG
 A C T G C G T A A C T G G A C T C G T A A C G T C G T A A C G T A C T G C T A G
A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G