Information for 9-AGTCTAGAGA (Motif 9)

C G T A A C T G A C G T A G T C A C G T C G T A A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T
p-value:1e-4
log p-value:-1.120e+01
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif21.28%
Number of Background Sequences with motif1818.5
Percentage of Background Sequences with motif3.98%
Average Position of motif in Targets648.8 +/- 279.1bp
Average Position of motif in Background509.5 +/- 308.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AGTCTAGAGA
CGTCTAGACA
 C G T A A C T G A C G T A G T C A C G T C G T A A C T G C G T A A C T G C G T A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

SMAD5/MA1557.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AGTCTAGAGA
TGTCTAGACA
 C G T A A C T G A C G T A G T C A C G T C G T A A C T G C G T A A C T G C G T A
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A

Smad4/MA1153.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGTCTAGAGA
TGTCTAGA--
 C G T A A C T G A C G T A G T C A C G T C G T A A C T G C G T A A C T G C G T A
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGTCTAGAGA
TWGTCTGV---
 A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G C G T A A C T G C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

ZBTB26/MA1579.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGTCTAGAGA-
NNNNTTTCTGGAGNN
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G C G T A A C T G C G T A A C G T
C T G A C A G T A G T C A C G T A C G T A G C T C A G T G A T C G A C T T C A G A C T G C G T A C T A G G C A T G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGTCTAGAGA
CTGTCTGG---
 A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G C G T A A C T G C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGTCTAGAGA----
NGNTCTAGAACCNGV
 A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AGTCTAGAGA--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G C G T A A C T G C G T A A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGTCTAGAGA
VBSYGTCTGG---
 A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G C G T A A C T G C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGTCTAGAGA---
-GGTTAGAGACCT
 C G T A A C T G A C G T A G T C A C G T C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T