Information for 7-CGCCCAGAGG (Motif 7)

G T A C C T A G A T G C A G T C A G T C G T C A A T C G C G T A C T A G A T C G
Reverse Opposite:
T A G C A G T C A C G T A T G C A C G T A C T G A C T G A T C G G A T C C A T G
p-value:1e-6
log p-value:-1.521e+01
Information Content per bp:1.841
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif23.40%
Number of Background Sequences with motif1476.0
Percentage of Background Sequences with motif3.23%
Average Position of motif in Targets606.2 +/- 275.9bp
Average Position of motif in Background621.7 +/- 298.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCAGAGG---
NTGCCCANNGGTNA
 A C G T G T A C C T A G A T G C A G T C A G T C G T C A A T C G C G T A C T A G A T C G A C G T A C G T A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGCCCAGAGG
TGCCCAGNHW
 G T A C C T A G A T G C A G T C A G T C G T C A A T C G C G T A C T A G A T C G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGCCCAGAGG-
ATGCCCTGAGGC
 A C G T G T A C C T A G A T G C A G T C A G T C G T C A A T C G C G T A C T A G A T C G A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

TFAP2A/MA0003.4/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CGCCCAGAGG----
NNGCCTGAGGCANN
 G T A C C T A G A T G C A G T C A G T C G T C A A T C G C G T A C T A G A T C G A C G T A C G T A C G T A C G T
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGCCCAGAGG----
GGGCCTGAGGCGGG
 G T A C C T A G A T G C A G T C A G T C G T C A A T C G C G T A C T A G A T C G A C G T A C G T A C G T A C G T
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCAGAGG-
WTGSCCTSAGGS
 A C G T G T A C C T A G A T G C A G T C A G T C G T C A A T C G C G T A C T A G A T C G A C G T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGCCCAGAGG--
TGCCCCCGGGCA
 G T A C C T A G A T G C A G T C A G T C G T C A A T C G C G T A C T A G A T C G A C G T A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGCCCAGAGG--
TGCCCCAGGGCA
 G T A C C T A G A T G C A G T C A G T C G T C A A T C G C G T A C T A G A T C G A C G T A C G T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGCCCAGAGG-
GTCCCCAGGGGA
 A C G T G T A C C T A G A T G C A G T C A G T C G T C A A T C G C G T A C T A G A T C G A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGCCCAGAGG--
TGCCCCAGGGCA
 G T A C C T A G A T G C A G T C A G T C G T C A A T C G C G T A C T A G A T C G A C G T A C G T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A