Information for 6-ACGGCACGTC (Motif 6)

C G T A A G T C C T A G A C T G A T G C C G T A A G T C A C T G A G C T G T A C
Reverse Opposite:
A C T G C T G A A G T C A C T G A C G T A T C G A G T C A G T C A C T G A C G T
p-value:1e-6
log p-value:-1.586e+01
Information Content per bp:1.892
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif8.51%
Number of Background Sequences with motif40.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets784.7 +/- 139.7bp
Average Position of motif in Background531.4 +/- 303.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF1A/MA1106.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:ACGGCACGTC-
-NNGCACGTNC
 C G T A A G T C C T A G A C T G A T G C C G T A A G T C A C T G A G C T G T A C A C G T
A C G T T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:ACGGCACGTC
--BGCACGTA
 C G T A A G T C C T A G A C T G A T G C C G T A A G T C A C T G A G C T G T A C
A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:ACGGCACGTC-
---GCACGTAY
 C G T A A G T C C T A G A C T G A T G C C G T A A G T C A C T G A G C T G T A C A C G T
A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:ACGGCACGTC-
---GCACGTNC
 C G T A A G T C C T A G A C T G A T G C C G T A A G T C A C T G A G C T G T A C A C G T
A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.72
Offset:3
Orientation:forward strand
Alignment:ACGGCACGTC---
---GCACGTACCC
 C G T A A G T C C T A G A C T G A T G C C G T A A G T C A C T G A G C T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

CREB3L4/MA1474.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACGGCACGTC---
-TGCCACGTCACC
 C G T A A G T C C T A G A C T G A T G C C G T A A G T C A C T G A G C T G T A C A C G T A C G T A C G T
A C G T A G C T C A T G G T A C G T A C T C G A A G T C T C A G A G C T T A G C T C G A A G T C A T G C

HES2/MA0616.2/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACGGCACGTC--
--GGCACGTGCC
 C G T A A G T C C T A G A C T G A T G C C G T A A G T C A C T G A G C T G T A C A C G T A C G T
A C G T A C G T A T C G C A T G T G A C C T G A A G T C A C T G A G C T T C A G A G T C A T G C

HES6/MA1493.1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACGGCACGTC--
--GGCACGTGTT
 C G T A A G T C C T A G A C T G A T G C C G T A A G T C A C T G A G C T G T A C A C G T A C G T
A C G T A C G T A C T G T A C G T A G C C G T A A G T C T A C G A C G T A C T G G C A T G A C T

HES7/MA0822.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACGGCACGTC---
-TGGCACGTGCCA
 C G T A A G T C C T A G A C T G A T G C C G T A A G T C A C T G A G C T G T A C A C G T A C G T A C G T
A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

HES5/MA0821.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACGGCACGTC---
-TGGCACGTGCCG
 C G T A A G T C C T A G A C T G A T G C C G T A A G T C A C T G A G C T G T A C A C G T A C G T A C G T
A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G