Information for 4-GGTTCTCAGA (Motif 4)

C T A G A T C G A C G T A G C T A G T C A G C T A T G C G T C A A C T G C G T A
Reverse Opposite:
C G A T A G T C A C G T A T C G C T G A A C T G C T G A C G T A A T G C G A T C
p-value:1e-7
log p-value:-1.622e+01
Information Content per bp:1.856
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif17.02%
Number of Background Sequences with motif545.5
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets558.1 +/- 205.4bp
Average Position of motif in Background493.3 +/- 279.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GGTTCTCAGA--
NTTTCTNAGAAA
 C T A G A T C G A C G T A G C T A G T C A G C T A T G C G T C A A C T G C G T A A C G T A C G T
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

Stat5b/MA1625.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGTTCTCAGA----
CATTTCCCAGAAATC
 A C G T C T A G A T C G A C G T A G C T A G T C A G C T A T G C G T C A A C T G C G T A A C G T A C G T A C G T A C G T
A G T C C T G A G C A T A G C T C G A T G A T C G A T C G T A C C T G A A C T G C T G A T C G A T C G A G C A T T A G C

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGTTCTCAGA-
ATTTCCAAGAA
 C T A G A T C G A C G T A G C T A G T C A G C T A T G C G T C A A C T G C G T A A C G T
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

RBPJ/MA1116.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGTTCTCAGA
NNTTCCCANN
 C T A G A T C G A C G T A G C T A G T C A G C T A T G C G T C A A C T G C G T A
A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G

Stat5a/MA1624.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGTTCTCAGA--
NNTTCTTGGAAN
 C T A G A T C G A C G T A G C T A G T C A G C T A T G C G T C A A C T G C G T A A C G T A C G T
C T G A C G A T G A C T G C A T T G A C G A C T C G A T C T A G C A T G G C T A C T G A G C T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGTTCTCAGA
HTTTCCCASG
 C T A G A T C G A C G T A G C T A G T C A G C T A T G C G T C A A C T G C G T A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGTTCTCAGA--
--TGCCCAGNHW
 C T A G A T C G A C G T A G C T A G T C A G C T A T G C G T C A A C T G C G T A A C G T A C G T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGTTCTCAGA---
AGTATTCTCGGTTGC
 A C G T A C G T C T A G A T C G A C G T A G C T A G T C A G C T A T G C G T C A A C T G C G T A A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGTTCTCAGA--
-TTTCCCAGAAN
 C T A G A T C G A C G T A G C T A G T C A G C T A T G C G T C A A C T G C G T A A C G T A C G T
A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

PB0194.1_Zbtb12_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGTTCTCAGA---
AGNGTTCTAATGANN
 A C G T A C G T C T A G A T C G A C G T A G C T A G T C A G C T A T G C G T C A A C T G C G T A A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A