Information for 8-GATGCTTTGC (Motif 8)

A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A G T C
p-value:1e-3
log p-value:-8.860e+00
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif1866.9
Percentage of Background Sequences with motif4.15%
Average Position of motif in Targets449.5 +/- 196.4bp
Average Position of motif in Background497.5 +/- 300.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GATGCTTTGC---
--NNCTTTGTTNN
 A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GATGCTTTGC--
NCCGTTGCTANGNGN
 A C G T A C G T A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GATGCTTTGC
-AAGCTTG--
 A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A G T C
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

TCF7/MA0769.2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GATGCTTTGC---
--TCCTTTGATGT
 A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GATGCTTTGC--
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Dmrt1/MA1603.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GATGCTTTGC---
GNTACTTTGTATC
 A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T
C A T G G C T A G C A T G C T A G A T C G C A T C G A T C G A T C T A G G C A T C G T A C G A T G A T C

ZNF682/MA1599.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GATGCTTTGC---
NNAGGGGCTTGGCCNN
 A C G T A C G T A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T
T C G A A G C T G C T A C A T G A T C G T C A G C T A G T A G C A C G T A C G T T C A G A T C G A G T C G A T C A G T C T C A G

NFIC/MA0161.2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GATGCTTTGC---
--TACTTGGCAGA
 A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

RFX1/MA0509.2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GATGCTTTGC--
CTGTTGCTATGGCA
 A C G T A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GATGCTTTGC---
---CCTTTGATGT
 A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T