Information for 6-GCGAACTCCG (Motif 6)

A C T G A G T C A T C G C G T A C G T A A G T C A G C T A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G C T G A A C T G A C G T A C G T A T G C A C T G A G T C
p-value:1e-4
log p-value:-1.133e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif128.0
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets844.8 +/- 98.1bp
Average Position of motif in Background609.2 +/- 318.4bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB7B/MA0694.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCGAACTCCG--
GCGACCACCGAA
 A C T G A G T C A T C G C G T A C G T A A G T C A G C T A G T C A G T C A C T G A C G T A C G T
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

ZBTB7C/MA0695.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCGAACTCCG--
GCGACCACCGAA
 A C T G A G T C A T C G C G T A C G T A A G T C A G C T A G T C A G T C A C T G A C G T A C G T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

HINFP/MA0131.2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCGAACTCCG
NCGCGGACGTTG
 A C G T A C G T A C T G A G T C A T C G C G T A C G T A A G T C A G C T A G T C A G T C A C T G
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCGAACTCCG
GGAAATTCCC
 A C T G A G T C A T C G C G T A C G T A A G T C A G C T A G T C A G T C A C T G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCGAACTCCG
----GCTCCG
 A C T G A G T C A T C G C G T A C G T A A G T C A G C T A G T C A G T C A C T G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

NR1I3/MA1534.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCGAACTCCG
ATGAACTTT-
 A C T G A G T C A T C G C G T A C G T A A G T C A G C T A G T C A G T C A C T G
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T

ZNF274/MA1592.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCGAACTCCG---
NNCGAGAACTCATACN
 A C G T A C G T A C G T A C T G A G T C A T C G C G T A C G T A A G T C A G C T A G T C A G T C A C T G A C G T A C G T A C G T
G T C A T C A G G A T C C T A G C G T A C A T G C T G A G T C A A T G C G A C T A G T C T G C A G A C T T C G A A G T C G A T C

VDR/MA0693.2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCGAACTCCG
-TGAACTCA-
 A C T G A G T C A T C G C G T A C G T A A G T C A G C T A G T C A G T C A C T G
A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCGAACTCCG
GGTGCCAAGT---
 A C G T A C G T A C G T A C T G A G T C A T C G C G T A C G T A A G T C A G C T A G T C A G T C A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

ZNF135/MA1587.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCGAACTCCG--
CCTCGACCTCCTGA
 A C G T A C G T A C T G A G T C A T C G C G T A C G T A A G T C A G C T A G T C A G T C A C T G A C G T A C G T
A G T C A G T C A G C T A G T C T C A G C T G A T A G C A G T C A G C T A T G C G A T C G A C T T C A G C T G A