Information for 4-CTAAACAGAC (Motif 4)

A G T C C G A T T G C A G T C A C G T A A T G C C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A T C G A C G T A C G T A C G T C G T A C T A G
p-value:1e-6
log p-value:-1.539e+01
Information Content per bp:1.870
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif14.58%
Number of Background Sequences with motif389.6
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets396.9 +/- 230.8bp
Average Position of motif in Background499.1 +/- 311.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP2/MA0593.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CTAAACAGAC
AAGTAAACAAA-
 A C G T A C G T A G T C C G A T T G C A G T C A C G T A A T G C C G T A A C T G C G T A A G T C
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CTAAACAGAC----
----CCAGACRSVB
 A G T C C G A T T G C A G T C A C G T A A T G C C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Foxf1/MA1606.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTAAACAGAC
ATGTAAACAAA-
 A C G T A C G T A G T C C G A T T G C A G T C A C G T A A T G C C G T A A C T G C G T A A G T C
C G T A C G A T T C A G C A G T G C T A G C T A C T G A A G T C G C T A C T G A C G T A A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CTAAACAGAC---
AAAGTAAACAAAAATT
 A C G T A C G T A C G T A G T C C G A T T G C A G T C A C G T A A T G C C G T A A C T G C G T A A G T C A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTAAACAGAC
GTAAACAG--
 A G T C C G A T T G C A G T C A C G T A A T G C C G T A A C T G C G T A A G T C
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTAAACAGAC
NDGTAAACARRN
 A C G T A C G T A G T C C G A T T G C A G T C A C G T A A T G C C G T A A C T G C G T A A G T C
G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A

FOXE1/MA1487.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTAAACAGAC---
CCTTAAATAAACAAT
 A C G T A C G T A G T C C G A T T G C A G T C A C G T A A T G C C G T A A C T G C G T A A G T C A C G T A C G T A C G T
A T G C T G A C A G C T C G A T T C G A C G T A C T G A A G C T G T C A G T C A C G T A A G T C C T G A C G T A G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CTAAACAGAC--
----CCAGACAG
 A G T C C G A T T G C A G T C A C G T A A T G C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

FOXL1/MA0033.2/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTAAACAGAC
GTAAACA---
 A G T C C G A T T G C A G T C A C G T A A T G C C G T A A C T G C G T A A G T C
C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T

FOXK2/MA1103.2/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTAAACAGAC
ATGTAAACAAG-
 A C G T A C G T A G T C C G A T T G C A G T C A C G T A A T G C C G T A A C T G C G T A A G T C
C G T A C G A T C T A G C G A T G C T A G T C A C T G A G A T C G C T A C G T A T C A G A C G T