Information for 9-CGGAGCMTCC (Motif 8)

A T G C A T C G A C T G G T C A A C T G A T G C G T C A A G C T A G T C A G T C
Reverse Opposite:
A C T G A C T G T C G A A C G T A T C G A G T C A C G T A G T C A T G C A T C G
p-value:1e-5
log p-value:-1.291e+01
Information Content per bp:1.793
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif34.00%
Number of Background Sequences with motif4344.8
Percentage of Background Sequences with motif9.67%
Average Position of motif in Targets715.3 +/- 242.1bp
Average Position of motif in Background668.8 +/- 290.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CGGAGCMTCC
CGGAGC----
 A T G C A T C G A C T G G T C A A C T G A T G C G T C A A G C T A G T C A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

ZBTB14/MA1650.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGGAGCMTCC
CCCCGCGCACCC
 A C G T A C G T A T G C A T C G A C T G G T C A A C T G A T G C G T C A A G C T A G T C A G T C
T A G C A T G C T A G C A T G C T A C G A T G C T A C G T A G C T G C A A T G C T A G C A T G C

CTCFL/MA1102.2/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGGAGCMTCC----
--GCGCCCCCTGNN
 A T G C A T C G A C T G G T C A A C T G A T G C G T C A A G C T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGGAGCMTCC----
NNNGGGGCGCCCCCNN
 A C G T A C G T A T G C A T C G A C T G G T C A A C T G A T G C G T C A A G C T A G T C A G T C A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGGAGCMTCC--
TGCCTGCGYCMCCTT
 A C G T A C G T A C G T A T G C A T C G A C T G G T C A A C T G A T G C G T C A A G C T A G T C A G T C A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGAGCMTCC
GGGAGGACNG
 A T G C A T C G A C T G G T C A A C T G A T G C G T C A A G C T A G T C A G T C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGAGCMTCC
AGCGCGCC---
 A C G T A T G C A T C G A C T G G T C A A C T G A T G C G T C A A G C T A G T C A G T C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

PLAGL2/MA1548.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGGAGCMTCC-
-TGGGCCCCCT
 A T G C A T C G A C T G G T C A A C T G A T G C G T C A A G C T A G T C A G T C A C G T
A C G T A C G T A C T G A C T G A T C G A T G C A G T C A G T C A G T C G A T C A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGAGCMTCC---
-GGACCACCCACG
 A T G C A T C G A C T G G T C A A C T G A T G C G T C A A G C T A G T C A G T C A C G T A C G T A C G T
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGGAGCMTCC--
CTGCGCATGCGC
 A T G C A T C G A C T G G T C A A C T G A T G C G T C A A G C T A G T C A G T C A C G T A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C