Information for 11-GTCTCTATTA (Motif 10)

A C T G A C G T A G T C A C G T A G T C A C G T C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T G T C A C G T A A C G T C G T A C T A G C G T A A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif8.00%
Number of Background Sequences with motif162.8
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets549.1 +/- 195.3bp
Average Position of motif in Background484.9 +/- 271.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTCTCTATTA
AGGTCTCTAACC
 A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T C G T A A C G T A C G T C G T A
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTCTCTATTA-
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

BARX1/MA0875.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GTCTCTATTA-
---GCAATTAG
 A C T G A C G T A G T C A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTCTCTATTA---
NNNTTTNTAATACNG
 A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Isl1/MA1608.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTCTCTATTA---
--ATCCATTAGCA
 A C T G A C G T A G T C A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A

SHOX/MA0630.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTCTCTATTA-
---NCAATTAN
 A C T G A C G T A G T C A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A G T C G A T C G C T A G T C A A G C T A G C T C G T A C T G A

LHX1/MA1518.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTCTCTATTA-
---GCAATTAC
 A C T G A C G T A G T C A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A T C G G A T C T G C A G C T A A C G T A G C T C G T A T A G C

EN2/MA0642.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTCTCTATTA--
--CCCAATTAGC
 A C T G A C G T A G T C A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTCTCTATTA-
---CCAATTAA
 A C T G A C G T A G T C A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A

PB0129.1_Glis2_2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTCTCTATTA-----
-TCTTTANTAATANN
 A C T G A C G T A G T C A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T