Information for 6-AGAAATAAAC (Motif 5)

T C G A C T A G G T C A C G T A C T G A A C G T T G C A C G T A C G T A A T G C
Reverse Opposite:
A T C G A C G T C G A T A C G T T G C A G A C T A C G T A C G T A G T C A G C T
p-value:1e-6
log p-value:-1.394e+01
Information Content per bp:1.766
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif32.00%
Number of Background Sequences with motif3592.3
Percentage of Background Sequences with motif7.92%
Average Position of motif in Targets455.1 +/- 262.2bp
Average Position of motif in Background494.6 +/- 322.9bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AGAAATAAAC-
--AAATAAACA
 T C G A C T A G G T C A C G T A C T G A A C G T T G C A C G T A C G T A A T G C A C G T
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGAAATAAAC
AAAAGTCAA-
 T C G A C T A G G T C A C G T A C T G A A C G T T G C A C G T A C G T A A T G C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AGAAATAAAC----
--AAACAAACATTC
 T C G A C T A G G T C A C G T A C T G A A C G T T G C A C G T A C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGAAATAAAC-
-AAAGTAAACA
 T C G A C T A G G T C A C G T A C T G A A C G T T G C A C G T A C G T A A T G C A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXP2/MA0593.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AGAAATAAAC---
--AAGTAAACAAA
 T C G A C T A G G T C A C G T A C T G A A C G T T G C A C G T A C G T A A T G C A C G T A C G T A C G T
A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGAAATAAAC-
GCTAARTAAACA
 A C G T T C G A C T A G G T C A C G T A C T G A A C G T T G C A C G T A C G T A A T G C A C G T
A T C G G A T C G C A T T C G A G C T A T C G A G C A T G T C A C G T A G T C A G A T C G C T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGAAATAAAC-
-AAAGTAAACA
 T C G A C T A G G T C A C G T A C T G A A C G T T G C A C G T A C G T A A T G C A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxf1/MA1606.1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGAAATAAAC---
--ATGTAAACAAA
 T C G A C T A G G T C A C G T A C T G A A C G T T G C A C G T A C G T A A T G C A C G T A C G T A C G T
A C G T A C G T C G T A C G A T T C A G C A G T G C T A G C T A C T G A A G T C G C T A C T G A C G T A

Foxj3/MA0851.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGAAATAAAC------
AAAAAGTAAACAAACAC
 A C G T T C G A C T A G G T C A C G T A C T G A A C G T T G C A C G T A C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGAAATAAAC------
AAAAAGTAAACAAACAC
 A C G T T C G A C T A G G T C A C G T A C T G A A C G T T G C A C G T A C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C