Information for 8-CGGAGCATCC (Motif 8)

G A T C A C T G A T C G T C G A A C T G T A G C T C G A A G C T A T G C G T A C
Reverse Opposite:
C A T G A T C G T C G A A G C T A T C G T G A C A G C T A T G C T G A C C T A G
p-value:1e-5
log p-value:-1.185e+01
Information Content per bp:1.615
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif26.00%
Number of Background Sequences with motif2782.1
Percentage of Background Sequences with motif6.12%
Average Position of motif in Targets586.7 +/- 285.8bp
Average Position of motif in Background601.6 +/- 292.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGGAGCATCC
CGGAGC----
 G A T C A C T G A T C G T C G A A C T G T A G C T C G A A G C T A T G C G T A C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGGAGCATCC
GGGAGGACNG
 G A T C A C T G A T C G T C G A A C T G T A G C T C G A A G C T A T G C G T A C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

RELB/MA1117.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGGAGCATCC
NNGGGGAATNC
 A C G T G A T C A C T G A T C G T C G A A C T G T A G C T C G A A G C T A T G C G T A C
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGGAGCATCC---
AGGGGATTCCCCT
 G A T C A C T G A T C G T C G A A C T G T A G C T C G A A G C T A T G C G T A C A C G T A C G T A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGGAGCATCC--
GGGGGAATCCCC
 G A T C A C T G A T C G T C G A A C T G T A G C T C G A A G C T A T G C G T A C A C G T A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGGAGCATCC--
CCACACAGCAGGAGA
 A C G T A C G T A C G T G A T C A C T G A T C G T C G A A C T G T A G C T C G A A G C T A T G C G T A C A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGGAGCATCC---
AGGGGAATCCCCT
 G A T C A C T G A T C G T C G A A C T G T A G C T C G A A G C T A T G C G T A C A C G T A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGGAGCATCC--
GAGCACAGCAGGACA
 A C G T A C G T A C G T G A T C A C T G A T C G T C G A A C T G T A G C T C G A A G C T A T G C G T A C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGGAGCATCC---
-GGACCACCCACG
 G A T C A C T G A T C G T C G A A C T G T A G C T C G A A G C T A T G C G T A C A C G T A C G T A C G T
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CGGAGCATCC--
CCACACAGCAGGAGA
 A C G T A C G T A C G T G A T C A C T G A T C G T C G A A C T G T A G C T C G A A G C T A T G C G T A C A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A