Information for 4-TAACAATKCH (Motif 4)

A C G T C G T A C T G A T G A C G C T A C G T A A C G T C A T G A T G C G T A C
Reverse Opposite:
C A T G T A C G G T A C G T C A C G A T C G A T A C T G G A C T G A C T T G C A
p-value:1e-7
log p-value:-1.800e+01
Information Content per bp:1.680
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif18.00%
Number of Background Sequences with motif581.4
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets461.1 +/- 264.2bp
Average Position of motif in Background427.1 +/- 297.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TAACAATKCH
NAACAAT---
 A C G T C G T A C T G A T G A C G C T A C G T A A C G T C A T G A T G C G T A C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----TAACAATKCH-
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A T G A C G C T A C G T A A C G T C A T G A T G C G T A C A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

SOX8/MA0868.2/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TAACAATKCH
AGAACAATGG-
 A C G T A C G T C G T A C T G A T G A C G C T A C G T A A C G T C A T G A T G C G T A C
T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TAACAATKCH
-AACAAT---
 A C G T C G T A C T G A T G A C G C T A C G T A A C G T C A T G A T G C G T A C
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----TAACAATKCH---
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A T G A C G C T A C G T A A C G T C A T G A T G C G T A C A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

SOX14/MA1562.1/Jaspar

Match Rank:6
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TAACAATKCH
CCGAACAATG--
 A C G T A C G T A C G T C G T A C T G A T G A C G C T A C G T A A C G T C A T G A T G C G T A C
T G A C G A T C C A T G C G T A G C T A A G T C C G T A G T C A A C G T C A T G A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TAACAATKCH
NNCNNAACAATTNT
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A T G A C G C T A C G T A A C G T C A T G A T G C G T A C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TAACAATKCH---
AATGAACAATGGAATT
 A C G T A C G T A C G T A C G T C G T A C T G A T G A C G C T A C G T A A C G T C A T G A T G C G T A C A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TAACAATKCH---
TNNAGAACAATANATNN
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A T G A C G C T A C G T A A C G T C A T G A T G C G T A C A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TAACAATKCH
GAACAATGG-
 A C G T C G T A C T G A T G A C G C T A C G T A A C G T C A T G A T G C G T A C
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T