Information for 2-ACTTCTCAAA (Motif 2)

G T C A A T G C C G A T A C G T A G T C A G C T A T G C G T C A G T C A G T C A
Reverse Opposite:
A C G T A C G T A C G T A T C G C T G A C T A G T G C A C G T A T A C G A C G T
p-value:1e-7
log p-value:-1.683e+01
Information Content per bp:1.833
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif20.41%
Number of Background Sequences with motif908.0
Percentage of Background Sequences with motif2.03%
Average Position of motif in Targets541.6 +/- 276.8bp
Average Position of motif in Background513.3 +/- 303.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF7/MA0769.2/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACTTCTCAAA---
--ANATCAAAGNN
 G T C A A T G C C G A T A C G T A G T C A G C T A T G C G T C A G T C A G T C A A C G T A C G T A C G T
A C G T A C G T C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

NKX2-2/MA1645.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACTTCTCAAA--
TAACCACTCAAGAA
 A C G T A C G T G T C A A T G C C G A T A C G T A G T C A G C T A T G C G T C A G T C A G T C A A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACTTCTCAAA--
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C G T G T C A A T G C C G A T A C G T A G T C A G C T A T G C G T C A G T C A G T C A A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

RBPJ/MA1116.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACTTCTCAAA
NNTTCCCANN
 G T C A A T G C C G A T A C G T A G T C A G C T A T G C G T C A G T C A G T C A
A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ACTTCTCAAA-
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G A T A C G T A G T C A G C T A T G C G T C A G T C A G T C A A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACTTCTCAAA--
NTTTCTNAGAAA
 G T C A A T G C C G A T A C G T A G T C A G C T A T G C G T C A G T C A G T C A A C G T A C G T
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

PH0140.1_Pknox1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ACTTCTCAAA--
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C G T G T C A A T G C C G A T A C G T A G T C A G C T A T G C G T C A G T C A G T C A A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ACTTCTCAAA--
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C G T G T C A A T G C C G A T A C G T A G T C A G C T A T G C G T C A G T C A G T C A A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ACTTCTCAAA--
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C G T G T C A A T G C C G A T A C G T A G T C A G C T A T G C G T C A G T C A G T C A A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACTTCTCAAA
GCTTCC----
 G T C A A T G C C G A T A C G T A G T C A G C T A T G C G T C A G T C A G T C A
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T