Information for 1-ATAT (Motif 6)

C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T
p-value:1e-1
log p-value:-2.866e+00
Information Content per bp:1.530
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif80.00%
Number of Background Sequences with motif30853.9
Percentage of Background Sequences with motif68.87%
Average Position of motif in Targets403.9 +/- 280.1bp
Average Position of motif in Background465.2 +/- 342.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)3.58
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.80
Offset:-7
Orientation:reverse strand
Alignment:-------ATAT---
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.80
Offset:-7
Orientation:reverse strand
Alignment:-------ATAT---
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Atoh1/MA0461.2/Jaspar

Match Rank:3
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---ATAT---
ANCATATGTT
 A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

OLIG3/MA0827.1/Jaspar

Match Rank:4
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---ATAT---
ACCATATGTT
 A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

NEUROG1/MA0623.2/Jaspar

Match Rank:5
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---ATAT---
GACATATGTC
 A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
T C A G T G C A A G T C C T G A A G C T C T G A A G C T A T C G A C G T A G T C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---ATAT----
AAGATATCCTT
 A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

OLIG2/MA0678.1/Jaspar

Match Rank:7
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ATAT---
ACCATATGGT
 A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

BHLHE22/MA0818.1/Jaspar

Match Rank:8
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ATAT---
ACCATATGTT
 A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T

PB0163.1_Six6_2/Jaspar

Match Rank:9
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------ATAT-------
ANNNGGATATATCCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ATAT--
CCATATGT
 A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T